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D2SEN0 (D2SEN0_GEOOG) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length610 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D2SEN0 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 8702C2321F17EAB6

FASTA61069,333
        10         20         30         40         50         60 
MTVPVPDLPA SRPEAPASAL PAPGTDPEWY KRAVFYEVLV RGFADSNADG VGDLRGMIDK 

        70         80         90        100        110        120 
LDYLQWLGVD CLWLPPFFAS PLRDGGYDVS DYTAVLPEFG DIDDFTEFLA AAHARGIRVI 

       130        140        150        160        170        180 
IDFVMNHTSD QHPWFQASRS DPEGPYGDFY VWSDDDTRYA DARIIFVDTE SSNWTFDPVR 

       190        200        210        220        230        240 
KQYFWHRFFS HQPDLNFENP RVIEAIMDAL RFWLDLGIDG FRLDAVPYLI EEEGTNCENL 

       250        260        270        280        290        300 
PGTHEILKQV RKVVDADYPD RVMLCEANQW PADVVEYFGE DGDECQMAFH FPVMPRLFMA 

       310        320        330        340        350        360 
VRREQRFPIS EIMAQTPEIP DNCQWGIFLR NHDELTLEMV TDEERDYMWA EYAKDPRMKA 

       370        380        390        400        410        420 
NIGIRRRLAP LLDNDMDTLE LFNALLLSLP GSPVLYYGDE IAMGDNIWLG DRDGVRTPMQ 

       430        440        450        460        470        480 
WTPDRNGGFS TADPQRMNLP LNQDPVYGYQ VTNVESQLRN TNSMLHWLRQ MIHVRKQHPT 

       490        500        510        520        530        540 
FGRGSYAEIG SRNPTVLSFV REFGDDVVLC VNNLSRFPQP VELDLRRFEG YTPIELTGRV 

       550        560        570        580        590        600 
EFPQIGVLPY MLTLSGHGFY WFELAKPAEP VEEPTETDDT AVADSLLAAG LVGSGEGPAA 

       610 
GDTADTGGAR 

« Hide

References

[1]"The complete genome of Geodermatophilus obscurus DSM 43160."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Munk A.C., Brettin T., Detter J.C., Han C., Larimer F., Land M. expand/collapse author list , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Schneider S., Klenk H.-P., Eisen J.A.
Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25078 / DSM 43160 / JCM 3152 / G-20.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001867 Genomic DNA. Translation: ADB76666.1.
RefSeqYP_003411037.1. NC_013757.1.

3D structure databases

ProteinModelPortalD2SEN0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB76666; ADB76666; Gobs_4101.
GeneID8755792.
KEGGgob:Gobs_4101.
PATRIC32177367. VBIGeoObs49253_4079.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000220639.
KOK05343.
OMARMKANIG.

Enzyme and pathway databases

BioCycGOBS526225:GI00-4150-MONOMER.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
TIGRFAMsTIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD2SEN0_GEOOG
AccessionPrimary (citable) accession number: D2SEN0
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 16, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)