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D2SDI4

- D2SDI4_GEOOG

UniProt

D2SDI4 - D2SDI4_GEOOG

Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Gobs_1723

Organism
Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (02 Mar 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. 4-aminobutyrate transaminase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. gamma-aminobutyric acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciGOBS526225:GI00-1751-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    4-aminobutyrate aminotransferaseImported
    Gene namesi
    Ordered Locus Names:Gobs_1723Imported
    OrganismiGeodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20)Imported
    Taxonomic identifieri526225 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeGeodermatophilaceaeGeodermatophilus
    ProteomesiUP000001382: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD2SDI4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000020206.
    KOiK07250.
    OMAiNIIPYES.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D2SDI4-1 [UniParc]FASTAAdd to Basket

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    MTDLLTGPHT VAQERRLVTE LPGPRSRELA ARRAAAVTSA VGSVLPVYIE    50
    RAAGGVVVDV DGNSFIDLGS GIAVTNVGHA APEVVAAVQA QVAAFTHTCF 100
    MVGPYEGYVA VAEELDRLTP GDHEKRTALF NTGAEAVENA VKVARVATGR 150
    SAVVVFDHAY HGRTNLTMAL TAKNMPYKHG FGPFAGEVYR VPMSYPYRDE 200
    PGTTGEQAAA RAIDLIETQI GAANVAAVLI EPIQGEGGFV VPAPGFLPAL 250
    TDWCRRSGAV FIADEVQTGF CRTGAWFASE HEGVVPDLIT TAKGIAGGMP 300
    LAGVTGRAEL MDAVHTGGLG GTYGGNPVSC AAALASIRIM RELDLNAAAR 350
    AIEATMLPRL RALQERTGVV GDVRGRGAML AVELVEPGTN EPDSALTNAI 400
    SKACHAEGVI TLTAGTHSNV LRFLPPLVIG QDLLTEGLDV LDAAFDAHVG 450
    K 451
    Length:451
    Mass (Da):46,944
    Last modified:March 2, 2010 - v1
    Checksum:i0E7B8C1730831E6A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001867 Genomic DNA. Translation: ADB74437.1.
    RefSeqiWP_012947877.1. NC_013757.1.
    YP_003408808.1. NC_013757.1.

    Genome annotation databases

    EnsemblBacteriaiADB74437; ADB74437; Gobs_1723.
    GeneIDi8753394.
    KEGGigob:Gobs_1723.
    PATRICi32172576. VBIGeoObs49253_1703.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001867 Genomic DNA. Translation: ADB74437.1 .
    RefSeqi WP_012947877.1. NC_013757.1.
    YP_003408808.1. NC_013757.1.

    3D structure databases

    ProteinModelPortali D2SDI4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADB74437 ; ADB74437 ; Gobs_1723 .
    GeneIDi 8753394.
    KEGGi gob:Gobs_1723.
    PATRICi 32172576. VBIGeoObs49253_1703.

    Phylogenomic databases

    HOGENOMi HOG000020206.
    KOi K07250.
    OMAi NIIPYES.

    Enzyme and pathway databases

    BioCyci GOBS526225:GI00-1751-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR004632. 4NH2But_aminotransferase_bac.
    IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR00700. GABAtrnsam. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 25078 / DSM 43160 / JCM 3152 / G-20Imported.

    Entry informationi

    Entry nameiD2SDI4_GEOOG
    AccessioniPrimary (citable) accession number: D2SDI4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 2, 2010
    Last sequence update: March 2, 2010
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3