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Protein
Submitted name:

4-aminobutyrate aminotransferase

Gene

Gobs_1723

Organism
Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciGOBS526225:GI00-1751-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
4-aminobutyrate aminotransferaseImported
Gene namesi
Ordered Locus Names:Gobs_1723Imported
OrganismiGeodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20)Imported
Taxonomic identifieri526225 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaGeodermatophilalesGeodermatophilaceaeGeodermatophilus
ProteomesiUP000001382 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi526225.Gobs_1723.

Structurei

3D structure databases

ProteinModelPortaliD2SDI4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK07250.
OMAiDIFEEEH.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D2SDI4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTDLLTGPHT VAQERRLVTE LPGPRSRELA ARRAAAVTSA VGSVLPVYIE
60 70 80 90 100
RAAGGVVVDV DGNSFIDLGS GIAVTNVGHA APEVVAAVQA QVAAFTHTCF
110 120 130 140 150
MVGPYEGYVA VAEELDRLTP GDHEKRTALF NTGAEAVENA VKVARVATGR
160 170 180 190 200
SAVVVFDHAY HGRTNLTMAL TAKNMPYKHG FGPFAGEVYR VPMSYPYRDE
210 220 230 240 250
PGTTGEQAAA RAIDLIETQI GAANVAAVLI EPIQGEGGFV VPAPGFLPAL
260 270 280 290 300
TDWCRRSGAV FIADEVQTGF CRTGAWFASE HEGVVPDLIT TAKGIAGGMP
310 320 330 340 350
LAGVTGRAEL MDAVHTGGLG GTYGGNPVSC AAALASIRIM RELDLNAAAR
360 370 380 390 400
AIEATMLPRL RALQERTGVV GDVRGRGAML AVELVEPGTN EPDSALTNAI
410 420 430 440 450
SKACHAEGVI TLTAGTHSNV LRFLPPLVIG QDLLTEGLDV LDAAFDAHVG

K
Length:451
Mass (Da):46,944
Last modified:March 2, 2010 - v1
Checksum:i0E7B8C1730831E6A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001867 Genomic DNA. Translation: ADB74437.1.
RefSeqiWP_012947877.1. NC_013757.1.
YP_003408808.1. NC_013757.1.

Genome annotation databases

EnsemblBacteriaiADB74437; ADB74437; Gobs_1723.
KEGGigob:Gobs_1723.
PATRICi32172576. VBIGeoObs49253_1703.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001867 Genomic DNA. Translation: ADB74437.1.
RefSeqiWP_012947877.1. NC_013757.1.
YP_003408808.1. NC_013757.1.

3D structure databases

ProteinModelPortaliD2SDI4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi526225.Gobs_1723.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADB74437; ADB74437; Gobs_1723.
KEGGigob:Gobs_1723.
PATRICi32172576. VBIGeoObs49253_1703.

Phylogenomic databases

HOGENOMiHOG000020206.
KOiK07250.
OMAiDIFEEEH.

Enzyme and pathway databases

BioCyciGOBS526225:GI00-1751-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR00700. GABAtrnsam. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 25078 / DSM 43160 / JCM 3152 / G-20Imported.

Entry informationi

Entry nameiD2SDI4_GEOOG
AccessioniPrimary (citable) accession number: D2SDI4
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: June 24, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.