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D2SDI4 (D2SDI4_GEOOG) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length451 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
D2SDI4 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 0E7B8C1730831E6A

FASTA45146,944
        10         20         30         40         50         60 
MTDLLTGPHT VAQERRLVTE LPGPRSRELA ARRAAAVTSA VGSVLPVYIE RAAGGVVVDV 

        70         80         90        100        110        120 
DGNSFIDLGS GIAVTNVGHA APEVVAAVQA QVAAFTHTCF MVGPYEGYVA VAEELDRLTP 

       130        140        150        160        170        180 
GDHEKRTALF NTGAEAVENA VKVARVATGR SAVVVFDHAY HGRTNLTMAL TAKNMPYKHG 

       190        200        210        220        230        240 
FGPFAGEVYR VPMSYPYRDE PGTTGEQAAA RAIDLIETQI GAANVAAVLI EPIQGEGGFV 

       250        260        270        280        290        300 
VPAPGFLPAL TDWCRRSGAV FIADEVQTGF CRTGAWFASE HEGVVPDLIT TAKGIAGGMP 

       310        320        330        340        350        360 
LAGVTGRAEL MDAVHTGGLG GTYGGNPVSC AAALASIRIM RELDLNAAAR AIEATMLPRL 

       370        380        390        400        410        420 
RALQERTGVV GDVRGRGAML AVELVEPGTN EPDSALTNAI SKACHAEGVI TLTAGTHSNV 

       430        440        450 
LRFLPPLVIG QDLLTEGLDV LDAAFDAHVG K 

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References

[1]"The complete genome of Geodermatophilus obscurus DSM 43160."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Munk A.C., Brettin T., Detter J.C., Han C., Larimer F., Land M. expand/collapse author list , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Schneider S., Klenk H.-P., Eisen J.A.
Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 25078 / DSM 43160 / JCM 3152 / G-20.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001867 Genomic DNA. Translation: ADB74437.1.
RefSeqYP_003408808.1. NC_013757.1.

3D structure databases

ProteinModelPortalD2SDI4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB74437; ADB74437; Gobs_1723.
GeneID8753394.
KEGGgob:Gobs_1723.
PATRIC32172576. VBIGeoObs49253_1703.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000020206.
KOK07250.
OMATSAAVFN.

Enzyme and pathway databases

BioCycGOBS526225:GI00-1751-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004632. 4NH2But_aminotransferase_bac.
IPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR00700. GABAtrnsam. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2SDI4_GEOOG
AccessionPrimary (citable) accession number: D2SDI4
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 16, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)