D2SC10 (D2SC10_GEOOG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribulose-bisphosphate carboxylase EMBL ADB74178.1
EC=4.1.1.39 EMBL ADB74178.1

Gene names

Ordered Locus Names:

Gobs_1448, Gobs_2026

Organism

Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) [Complete proteome] [HAMAP]

Taxonomic identifier

526225 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Geodermatophilaceae › Geodermatophilus › Geodermatophilus obscurus

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
Molecular function	Lyase EMBL ADB74178.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: InterPro ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2SC10 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: DDB04C3DE86F7EC0	FASTA	420	44,185
	10 20 30 40 50 60 MRDPRRIRCT YYIEAVDVAR AAAALAGEQS SGTFIAVPGE SDRIRERHAA EVVAIRELGE 70 80 90 100 110 120 CAPSLPSRRR PERVTAAEVV VEFPMVNIGT DIATLLTAVA GNLFELVELY ACRLQSIGLP 130 140 150 160 170 180 DEFVAAHPGP AFGVAGTRKL MGVPDGVLIG TIVKPNVGLV EEEFRGVVRE LARASIDLIK 190 200 210 220 230 240 DDELMTDPAY LPLETRVRVA LEEIADAEQV TGHRTMYAFN ITGDLAGLQR RHDLVVEAGG 250 260 270 280 290 300 NCVMLNVPVM GLPALAWLRG FAQVPIHGHR AGLAASMRSP ALGVDFTVWQ QLARLAGADH 310 320 330 340 350 360 VHASGLGSKF YERDEQVAAN IRSLQAPLGT TTAPLPTLSS GQNVHTPGPT FAAVGSTDLL 370 380 390 400 410 420 MLAGGGIAAH PDGPAAGVRS LRQAWIAAVS GSPLADAAAE HAARGDSALA HALQTFPAGA

References

[1]

"The complete genome of Geodermatophilus obscurus DSM 43160." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Munk A.C., Brettin T., Detter J.C., Han C., Larimer F., Land M. , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Schneider S., Klenk H.-P., Eisen J.A. Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 25078 / DSM 43160 / JCM 3152 / G-20.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001867 Genomic DNA. Translation: ADB74178.1. CP001867 Genomic DNA. Translation: ADB74715.1.
RefSeq	YP_003408549.1. NC_013757.1. YP_003409086.1. NC_013757.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB74178; ADB74178; Gobs_1448. ADB74715; ADB74715; Gobs_2026.
GeneID	8753113. 8753697.
KEGG	gob:Gobs_1448. gob:Gobs_2026.
PATRIC	32172026. VBIGeoObs49253_1432.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000230831.
KO	K01601.
OMA	NITDEVD.
Enzyme and pathway databases
BioCyc	GOBS526225:GI00-1470-MONOMER. GOBS526225:GI00-2054-MONOMER.
Family and domain databases
Gene3D	3.20.20.110. 1 hit. 3.30.70.150. 1 hit.
InterPro	IPR000685. RuBisCO_lsu_C. IPR017443. RuBisCO_lsu_fd_N. [Graphical view]
Pfam	PF00016. RuBisCO_large. 1 hit. [Graphical view]
SUPFAM	SSF51649. RuBisCO_large. 1 hit. SSF54966. RuBisCO_large. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D2SC10_GEOOG

Accession

Primary (citable) accession number: D2SC10

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)