D2S8W2 (D2S8W2_GEOOG) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595
Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595

Gene names

Name:	ppc HAMAP-Rule MF_00595
Ordered Locus Names:	Gobs_0841

Organism

Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) [Complete proteome] [HAMAP]

Taxonomic identifier

526225 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Geodermatophilaceae › Geodermatophilus › Geodermatophilus obscurus

Protein attributes

Sequence length	939 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595
Catalytic activity	Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS018129
Cofactor	Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS018129
Subunit structure	Homotetramer By similarity. HAMAP-Rule MF_00595
Sequence similarities	Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Ontologies

Keywords
Biological process	Carbon dioxide fixation HAMAP-Rule MF_00595 SAAS SAAS018129
Ligand	Magnesium HAMAP-Rule MF_00595 SAAS SAAS018129 Pyruvate EMBL ADB73605.1
Molecular function	Lyase HAMAP-Rule MF_00595 SAAS SAAS018129 EMBL ADB73605.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: HAMAP oxaloacetate metabolic process Inferred from electronic annotation. Source: HAMAP tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	magnesium ion binding Inferred from electronic annotation. Source: HAMAP phosphoenolpyruvate carboxylase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	162	1	By similarity HAMAP-Rule MF_00595
	Active site	596	1	By similarity HAMAP-Rule MF_00595

Sequences

	Sequence		Length	Mass (Da)
	D2S8W2 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: 0E2065F941A03AD0	FASTA	939	102,921
	10 20 30 40 50 60 MSEATVDVAD LRHHGGAEED GADAADAPLR EDIRLLGRVL GEVIREQSGD DVLALVEATR 70 80 90 100 110 120 VEAFRLRRSE VDRADVAARL DGLDVRSANH VIRAFSHFSL LANLAEDVHH ERRRRFHRLE 130 140 150 160 170 180 GSPPQKGSLA ATFELLDAAH LDADVVAREL AGALVSPVVT AHPTEVRRRT ISRVQRQVTE 190 200 210 220 230 240 LIRRRDRSAP GEADDPAWSG ELQRAVLTLW QTALLRLSRL RLADEIDEAL RYYEMSLFEV 250 260 270 280 290 300 VPAINAELRR ALHARWPSAG SDRPVLRPGS WIGGDRDGNP FVTADAVHLA STRQAQTALG 310 320 330 340 350 360 HHLSELLALH DELSMSDRLI TPTPELAQLA AASGDDSRFR ADEPYRRALY GVHARLAATA 370 380 390 400 410 420 QRVLGSVPGP PPHAVLEPYA TPEEVLADLA TVDASLRAHG AAALADDRLA RLREAVEVFG 430 440 450 460 470 480 FHLAGLDMRQ NSAVHAEVLA ELFAWAGVCP DYAALDEKQR VELLVGELRM RRPLVRPDAA 490 500 510 520 530 540 LSDLARGELD VLLAAADQVR ALGPEAVPNY VISMCESVSD VLEVAVLLKE VGLLDPGGDG 550 560 570 580 590 600 GPTCPVGISP LFETIGDLQH AAETLTAVLG QPLYRALLRN RGDVQEVMLG YSDSNKDGGY 610 620 630 640 650 660 LAANWALYRA ELALVEVARR EGVRLRLFHG RGGTVGRGGG PSYDAIRAQP PGAVAGALRI 670 680 690 700 710 720 TEQGEVIAAK YAEPDRARRN LEAMVAATLE ASLLDTEGLG DDAEPAYALL DDLAARAQQA 730 740 750 760 770 780 YRALVHETPG FVEWFRAATP IGELAELNIG SRPPSRKAGD SIADLRAIPW VFSWSQARIM 790 800 810 820 830 840 LPGWYGTGSA LESWVEGDPA RLTRLQELHR RWPWFRTMLS NMGMVLAKTD LDLAARYAEL 850 860 870 880 890 900 VPDEQLRHRV FDQLTAEHER SCRMLLAVTG DDRLLADNPA LARSIRNRFP YLEPLHHLQV 910 920 930 EMLRRRRGHD GQDGDDDELV RRNIQLTING IATALRNSG

References

[1]

"The complete genome of Geodermatophilus obscurus DSM 43160." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Munk A.C., Brettin T., Detter J.C., Han C., Larimer F., Land M. , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Jando M., Schneider S., Klenk H.-P., Eisen J.A. Submitted (JAN-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 25078 / DSM 43160 / JCM 3152 / G-20.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001867 Genomic DNA. Translation: ADB73605.1.
RefSeq	YP_003407976.1. NC_013757.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB73605; ADB73605; Gobs_0841.
GeneID	8752498.
KEGG	gob:Gobs_0841.
PATRIC	32170818. VBIGeoObs49253_0834.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000238647.
KO	K01595.
OMA	AIPWVFG.
Enzyme and pathway databases
BioCyc	GOBS526225:GI00-855-MONOMER.
Family and domain databases
HAMAP	MF_00595. PEPcase_type1.
InterPro	IPR021135. PEP_COase. IPR018129. PEP_COase_AS. IPR022805. PEP_COase_bac/pln-type. IPR015813. Pyrv/PenolPyrv_Kinase. [Graphical view]
Pfam	PF00311. PEPcase. 1 hit. [Graphical view]
PRINTS	PR00150. PEPCARBXLASE.
SUPFAM	SSF51621. Pyrv/PenolPyrv_Kinase_cat. 1 hit.
PROSITE	PS00781. PEPCASE_1. 1 hit. PS00393. PEPCASE_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2S8W2_GEOOG

Accession

Primary (citable) accession number: D2S8W2

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)