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Protein
Submitted name:

Phosphomethylpyrimidine kinase

Gene

Acfer_0462

Organism
Acidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

KinaseSAAS annotationImported, Transferase

Keywords - Ligandi

ATP-bindingSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Phosphomethylpyrimidine kinaseImported
Gene namesi
Ordered Locus Names:Acfer_0462Imported
OrganismiAcidaminococcus fermentans (strain ATCC 25085 / DSM 20731 / VR4)Imported
Taxonomic identifieri591001 [NCBI]
Taxonomic lineageiBacteriaFirmicutesNegativicutesAcidaminococcalesAcidaminococcaceaeAcidaminococcus
Proteomesi
  • UP000001902 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi591001.Acfer_0462.

Structurei

3D structure databases

ProteinModelPortaliD2RIG3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 259Phos_pyr_kinInterPro annotationAdd BLAST249

Phylogenomic databases

eggNOGiENOG4105DWF. Bacteria.
COG0351. LUCA.
HOGENOMiHOG000225275.
KOiK00941.
OMAiRINITHG.
OrthoDBiPOG091H01V0.

Family and domain databases

CDDicd01169. HMPP_kinase. 1 hit.
Gene3Di3.40.1190.20. 1 hit.
InterProiIPR004399. HMP/HMP-P_kinase.
IPR013749. PM/HMP-P_kinase-1.
IPR029056. Ribokinase-like.
[Graphical view]
PfamiPF08543. Phos_pyr_kin. 1 hit.
[Graphical view]
SUPFAMiSSF53613. SSF53613. 1 hit.
TIGRFAMsiTIGR00097. HMP-P_kinase. 1 hit.

Sequencei

Sequence statusi: Complete.

D2RIG3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFHLLTIAGS DSSGGAGIQA DLKTFAAHGC YGMSVITAVT AQNTTGVTAI
60 70 80 90 100
QNIDPEVVEA QIDAVFQDIR VDGVKVGMVS NSALIRAIAK KMQQYAPPVL
110 120 130 140 150
VVDPVMVATS GSYLLEKEAR KDLQEKLLPL ATLITPNMQE GEALSGLSIH
160 170 180 190 200
SREDMEKAAA VICQKGARAV LLKGGHLAET ADDYLLYPGE GNWLQGKWFP
210 220 230 240 250
GQRFANPNTH GTGCSLSSAL ASEMAAGASL PEAVEKAKAY VALGIQHGLA
260 270
VGHGHGPIHH FVDLYRKAGW EEGK
Length:274
Mass (Da):28,928
Last modified:March 2, 2010 - v1
Checksum:iAE6EDDFDC99FECC0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001859 Genomic DNA. Translation: ADB46865.1.
RefSeqiWP_012937855.1. NC_013740.1.

Genome annotation databases

EnsemblBacteriaiADB46865; ADB46865; Acfer_0462.
KEGGiafn:Acfer_0462.
PATRICi31907505. VBIAciFer109666_0490.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001859 Genomic DNA. Translation: ADB46865.1.
RefSeqiWP_012937855.1. NC_013740.1.

3D structure databases

ProteinModelPortaliD2RIG3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi591001.Acfer_0462.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADB46865; ADB46865; Acfer_0462.
KEGGiafn:Acfer_0462.
PATRICi31907505. VBIAciFer109666_0490.

Phylogenomic databases

eggNOGiENOG4105DWF. Bacteria.
COG0351. LUCA.
HOGENOMiHOG000225275.
KOiK00941.
OMAiRINITHG.
OrthoDBiPOG091H01V0.

Family and domain databases

CDDicd01169. HMPP_kinase. 1 hit.
Gene3Di3.40.1190.20. 1 hit.
InterProiIPR004399. HMP/HMP-P_kinase.
IPR013749. PM/HMP-P_kinase-1.
IPR029056. Ribokinase-like.
[Graphical view]
PfamiPF08543. Phos_pyr_kin. 1 hit.
[Graphical view]
SUPFAMiSSF53613. SSF53613. 1 hit.
TIGRFAMsiTIGR00097. HMP-P_kinase. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD2RIG3_ACIFV
AccessioniPrimary (citable) accession number: D2RIG3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: November 2, 2016
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.