D2RE12 (D2RE12_ARCPA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ADB58356.1

Gene names

Ordered Locus Names:

Arcpr_1305

Organism

Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) [Complete proteome] [HAMAP] EMBL ADB58356.1

Taxonomic identifier

572546 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Archaeoglobi › Archaeoglobales › Archaeoglobaceae › Archaeoglobus › Archaeoglobus profundus

Protein attributes

Sequence length	382 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ADB58356.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2RE12 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: A825133C1731BE80	FASTA	382	44,355
	10 20 30 40 50 60 MKDIASAIGV SAPALRELFR RDILRKAFIS HPFFSDVLEA YKLDRKFGGF EEGTLIAKTV 70 80 90 100 110 120 EGVEIVRGFP KIKRALTLYP TIKKHFKGDV AIEEKMNGYN VRIVKFGEKL YAITRGGFIC 130 140 150 160 170 180 PYTTEKVRLI FDKSFFKDHP NLMLCCEAVG EESPYVPSSI YGERLDFYVF DIRDKSTNEA 190 200 210 220 230 240 LSIKEKERIC ENYGFNMATI FDVVSSKIAH EVVRDVIEKI GKEGREGVVI KDVEMKEPPI 250 260 270 280 290 300 KYTTSQANCS DLSYGFRYFG EYGKDFLFSR LIREGFQSWE FCESEENMYE RALRIGKAIL 310 320 330 340 350 360 FSMVESIRNV KDRGKVYENM RLRFYDLEVF ELFKEHVRRM GVSAKFSDPI QDEDGSYVVH 370 380 YYKYMKSTTD IVKHILEGNL WS

References

[1]

"Complete genome sequence of Archaeoglobus profundus type strain (AV18)." von Jan M., Lapidus A., Glavina del Rio T., Copeland A., Tice H., Cheng J.-F., Lucas S., Chen F., Nolan M., Goodwin L., Han C., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Ovchinnikova G., Chertkov O., Pati A. , Chen A., Palaniappan K., Land M., Hauser L., Chang Y.-J., Jeffries C.D., Saunders E., Brettin T., Detter J.C., Chain P., Eichinger K., Huber H., Spring S., Rohde M., Goker M., Wirth R., Woyke T., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H.-P. Stand. Genomic Sci. 2:327-346(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 5631 / JCM 9629 / NBRC 100127 / Av18.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001857 Genomic DNA. Translation: ADB58356.1.
RefSeq	YP_003401029.1. NC_013741.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB58356; ADB58356; Arcpr_1305.
GeneID	8739992.
KEGG	apo:Arcpr_1305.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000224394.
KO	K07468.
OMA	EEKMNGY.
Enzyme and pathway databases
BioCyc	APRO572546:GJI1-1350-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR001072. Uncharacterised_MJ0414. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PRINTS	PR01048. Y414FAMILY.
TIGRFAMs	TIGR01209. TIGR01209. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D2RE12_ARCPA

Accession

Primary (citable) accession number: D2RE12

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)