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Protein
Submitted name:

Protein phosphatase 2C

Gene

HMPREF0424_0034

Organism
Gardnerella vaginalis (strain 409-05)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciGVAG553190:GJPT-34-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein phosphatase 2CImported
Gene namesi
Ordered Locus Names:HMPREF0424_0034Imported
OrganismiGardnerella vaginalis (strain 409-05)Imported
Taxonomic identifieri553190 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella
ProteomesiUP000001888 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD2RCM8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000235782.
KOiK01090.
OMAiNQDSGYA.
OrthoDBiEOG65N17S.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.

Sequencei

Sequence statusi: Complete.

D2RCM8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKQINSNNEE EIQTAVTGQI EKISSITDKN DIKENRANSV EKILFMYATA
60 70 80 90 100
VSDVGTVRSN NQDSAFAGEH LAAICDGMGG HAGGDTASTI AIRSLAHIEQ
110 120 130 140 150
DSRPHDVKTV SSMMETSIMA AHDAIVGKAK RERRLAGMGT TVTAVTLVRG
160 170 180 190 200
YWVLAHLGDS RAYLLRDNHL MRMTTDHSYV QHLIDTGHIT PEEARNHPQR
210 220 230 240 250
NVVMRVLGDF DIDPRPDIAL RSAHPSDRWL LCSDGLCGVL EDSTIQDVMS
260 270 280 290 300
SISNQEECAQ KLVSMALRAG STDNVTAVIA DATLALDADA FDLPHQTPLI
310 320 330 340 350
GGAASKDLES IADIVNKAVA SAPALREDKN SPAQRAAALA QDDDNSKNPD
360 370 380 390 400
EGTISITRIV QPSHIREEVG ELHTPDTNEI PIVKKKNGKV STDPHDPDVA
410 420 430 440 450
RAVKHEQDEA HRAHSLRRRW TRIGISLGIL LVLFVISGVG YGVYAWTQTQ
460 470 480 490 500
YYIGKDSNKV VIYQGVPTNI FGIALSHKVE STDIPVNKLD KSWQDQLKEG
510 520 530 540 550
ISFGSLVEAR GHASLIRREM RAREQEKLNE QNQKKLENKI NKNKDNAKQG

GKTS
Length:554
Mass (Da):60,692
Last modified:March 2, 2010 - v1
Checksum:iCD735CB36A5CDD47
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001849 Genomic DNA. Translation: ADB13641.1.
RefSeqiWP_004109546.1. NC_013721.1.
YP_003373305.1. NC_013721.1.

Genome annotation databases

EnsemblBacteriaiADB13641; ADB13641; HMPREF0424_0034.
KEGGigva:HMPREF0424_0034.
PATRICi32146070. VBIGarVag136958_0030.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001849 Genomic DNA. Translation: ADB13641.1.
RefSeqiWP_004109546.1. NC_013721.1.
YP_003373305.1. NC_013721.1.

3D structure databases

ProteinModelPortaliD2RCM8.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADB13641; ADB13641; HMPREF0424_0034.
KEGGigva:HMPREF0424_0034.
PATRICi32146070. VBIGarVag136958_0030.

Phylogenomic databases

HOGENOMiHOG000235782.
KOiK01090.
OMAiNQDSGYA.
OrthoDBiEOG65N17S.

Enzyme and pathway databases

BioCyciGVAG553190:GJPT-34-MONOMER.

Family and domain databases

Gene3Di3.60.40.10. 1 hit.
InterProiIPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERiPTHR13832. PTHR13832. 1 hit.
PfamiPF00481. PP2C. 1 hit.
[Graphical view]
SMARTiSM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMiSSF81606. SSF81606. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential."
    Yeoman C.J., Yildirim S., Thomas S.M., Durkin A.S., Torralba M., Sutton G., Buhay C.J., Ding Y., Dugan-Rocha S.P., Muzny D.M., Qin X., Gibbs R.A., Leigh S.R., Stumpf R., White B.A., Highlander S.K., Nelson K.E., Wilson B.A.
    PLoS ONE 5:E12411-E12411(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 409-05Imported.

Entry informationi

Entry nameiD2RCM8_GARV4
AccessioniPrimary (citable) accession number: D2RCM8
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: April 1, 2015
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.