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D2RCL2 (D2RCL2_GARV4) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.31 EMBL ADB14120.1
Gene names
Name:ppc EMBL ADB14120.1
Ordered Locus Names:HMPREF0424_0018 EMBL ADB14120.1
OrganismGardnerella vaginalis (strain 409-05) [Complete proteome] [HAMAP] EMBL ADB14120.1
Taxonomic identifier553190 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella

Protein attributes

Sequence length918 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. SAAS SAAS021135

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. SAAS SAAS021135

Cofactor

Magnesium By similarity. SAAS SAAS021135

Sequences

Sequence LengthMass (Da)Tools
D2RCL2 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: B167FED09002C5BD

FASTA918103,055
        10         20         30         40         50         60 
MATENQQVTP ADATIVTSGL GRKGPEERDL PASLKQDMDL CLHILRDVLG EFDEKLLAVF 

        70         80         90        100        110        120 
DDVRLNAVEA SAAHFAQMVD AKVTADDGLS KAVSKLNGMN LHDTQLLARA FATYFHLANL 

       130        140        150        160        170        180 
CEENYRVSVL HQRECEVEDS LPVDPVNELT CAYHKLLTEM SPAEAKELLA KLEFHPVFTA 

       190        200        210        220        230        240 
HPTEARRKAV AGKIRRISQL LSEHHRLGGS DKRENYRRLY NEIDALLRTS PIALKKPTPV 

       250        260        270        280        290        300 
EESDTILDIF DATLFDTIPV VYRRFDDWLL GKKAGLVPPR CPAFFHPGSW IGSDRDGNPN 

       310        320        330        340        350        360 
VTAKVSRQVA RKFSDHVLAA LENRTREVGK CLTMETRTTP PSVELLELWN RQREMSEQLT 

       370        380        390        400        410        420 
ENASDVSNSE PHRAVMLVMA DRLHRTISRD TDLMYHSCED FIEDLQIVQR SLAEGGDPRA 

       430        440        450        460        470        480 
AYGPLQDLIW QAQTFGFHMV EMEFRQHSLV HSRALEDIRE HGLHGERGPL QPMTREVLDT 

       490        500        510        520        530        540 
FRALGAIQKR NGMRAARRYI ISFAKSAQHV RDVFELNRLA FAHPQDAPTI DVIPLFEQLE 

       550        560        570        580        590        600 
DLQNSVNVLE EIIKIPEVQA RLKATGRKME VMLGYSDSSK DAGPTSATLA LHSAQERIAK 

       610        620        630        640        650        660 
WAKKHDIDLT LFHGRGGAVG RGGGPANRAV LAQPVGSVNC RFKLTEQGEV IFARYGNPIL 

       670        680        690        700        710        720 
AIRHVESVAS ATLLQSSPSV EKTNTDMTKK YADMAAKLDV AAHERFLDLL QTDDFTPWFS 

       730        740        750        760        770        780 
TVTPLSEIGL LPIGSRPAKR GLGAKSLDDL RTIPWVFSWA QARINLAAWY GLGTACEKFG 

       790        800        810        820        830        840 
DLETLRRAYE EWPLFSTFID NIEMSLAKTD ERIARMYLSL GDREDLSDKV LSEMQLTRKW 

       850        860        870        880        890        900 
VLQIVDDKWP LQHRHVLGQA IRVRSPYVDA LSVIQSLALH KLRNKVDKEE LSESQQAEFI 

       910 
YLILCTVSGV AAGLQNTG 

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References

[1]"Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential."
Yeoman C.J., Yildirim S., Thomas S.M., Durkin A.S., Torralba M., Sutton G., Buhay C.J., Ding Y., Dugan-Rocha S.P., Muzny D.M., Qin X., Gibbs R.A., Leigh S.R., Stumpf R., White B.A., Highlander S.K., Nelson K.E., Wilson B.A.
PLoS ONE 5:E12411-E12411(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 409-05.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001849 Genomic DNA. Translation: ADB14120.1.
RefSeqYP_003373289.1. NC_013721.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB14120; ADB14120; HMPREF0424_0018.
GeneID8709370.
KEGGgva:HMPREF0424_0018.
PATRIC32146038. VBIGarVag136958_0014.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000238647.
KOK01595.
OMAAIPWVFG.
OrthoDBEOG6TJ7T8.

Enzyme and pathway databases

BioCycGVAG553190:GJPT-18-MONOMER.

Family and domain databases

InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2RCL2_GARV4
AccessionPrimary (citable) accession number: D2RCL2
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: November 13, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)