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D2RCL2

- D2RCL2_GARV4

UniProt

D2RCL2 - D2RCL2_GARV4

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Protein
Submitted name: Phosphoenolpyruvate carboxykinase (GTP)
Gene
ppc, HMPREF0424_0018
Organism
Gardnerella vaginalis (strain 409-05)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity.SAAS annotations

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.SAAS annotations

Cofactori

Magnesium By similarity.SAAS annotations

GO - Molecular functioni

  1. kinase activity Source: UniProtKB-KW
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. carbon fixation Source: UniProtKB-KW
  2. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

KinaseImported, LyaseSAAS annotationsImported, Transferase

Keywords - Biological processi

Carbon dioxide fixationSAAS annotations

Keywords - Ligandi

MagnesiumSAAS annotations, PyruvateImported

Enzyme and pathway databases

BioCyciGVAG553190:GJPT-18-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Phosphoenolpyruvate carboxykinase (GTP)Imported (EC:4.1.1.31Imported)
Gene namesi
Name:ppcImported
Ordered Locus Names:HMPREF0424_0018Imported
OrganismiGardnerella vaginalis (strain 409-05)Imported
Taxonomic identifieri553190 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella
ProteomesiUP000001888: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000238647.
KOiK01595.
OMAiWYGAGSA.
OrthoDBiEOG6TJ7T8.

Family and domain databases

InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D2RCL2-1 [UniParc]FASTAAdd to Basket

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MATENQQVTP ADATIVTSGL GRKGPEERDL PASLKQDMDL CLHILRDVLG    50
EFDEKLLAVF DDVRLNAVEA SAAHFAQMVD AKVTADDGLS KAVSKLNGMN 100
LHDTQLLARA FATYFHLANL CEENYRVSVL HQRECEVEDS LPVDPVNELT 150
CAYHKLLTEM SPAEAKELLA KLEFHPVFTA HPTEARRKAV AGKIRRISQL 200
LSEHHRLGGS DKRENYRRLY NEIDALLRTS PIALKKPTPV EESDTILDIF 250
DATLFDTIPV VYRRFDDWLL GKKAGLVPPR CPAFFHPGSW IGSDRDGNPN 300
VTAKVSRQVA RKFSDHVLAA LENRTREVGK CLTMETRTTP PSVELLELWN 350
RQREMSEQLT ENASDVSNSE PHRAVMLVMA DRLHRTISRD TDLMYHSCED 400
FIEDLQIVQR SLAEGGDPRA AYGPLQDLIW QAQTFGFHMV EMEFRQHSLV 450
HSRALEDIRE HGLHGERGPL QPMTREVLDT FRALGAIQKR NGMRAARRYI 500
ISFAKSAQHV RDVFELNRLA FAHPQDAPTI DVIPLFEQLE DLQNSVNVLE 550
EIIKIPEVQA RLKATGRKME VMLGYSDSSK DAGPTSATLA LHSAQERIAK 600
WAKKHDIDLT LFHGRGGAVG RGGGPANRAV LAQPVGSVNC RFKLTEQGEV 650
IFARYGNPIL AIRHVESVAS ATLLQSSPSV EKTNTDMTKK YADMAAKLDV 700
AAHERFLDLL QTDDFTPWFS TVTPLSEIGL LPIGSRPAKR GLGAKSLDDL 750
RTIPWVFSWA QARINLAAWY GLGTACEKFG DLETLRRAYE EWPLFSTFID 800
NIEMSLAKTD ERIARMYLSL GDREDLSDKV LSEMQLTRKW VLQIVDDKWP 850
LQHRHVLGQA IRVRSPYVDA LSVIQSLALH KLRNKVDKEE LSESQQAEFI 900
YLILCTVSGV AAGLQNTG 918
Length:918
Mass (Da):103,055
Last modified:March 2, 2010 - v1
Checksum:iB167FED09002C5BD
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001849 Genomic DNA. Translation: ADB14120.1.
RefSeqiWP_012913687.1. NC_013721.1.
YP_003373289.1. NC_013721.1.

Genome annotation databases

EnsemblBacteriaiADB14120; ADB14120; HMPREF0424_0018.
GeneIDi8709370.
KEGGigva:HMPREF0424_0018.
PATRICi32146038. VBIGarVag136958_0014.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001849 Genomic DNA. Translation: ADB14120.1 .
RefSeqi WP_012913687.1. NC_013721.1.
YP_003373289.1. NC_013721.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADB14120 ; ADB14120 ; HMPREF0424_0018 .
GeneIDi 8709370.
KEGGi gva:HMPREF0424_0018.
PATRICi 32146038. VBIGarVag136958_0014.

Phylogenomic databases

HOGENOMi HOG000238647.
KOi K01595.
OMAi WYGAGSA.
OrthoDBi EOG6TJ7T8.

Enzyme and pathway databases

BioCyci GVAG553190:GJPT-18-MONOMER.

Family and domain databases

InterProi IPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view ]
Pfami PF00311. PEPcase. 2 hits.
[Graphical view ]
PRINTSi PR00150. PEPCARBXLASE.
SUPFAMi SSF51621. SSF51621. 1 hit.
PROSITEi PS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential."
    Yeoman C.J., Yildirim S., Thomas S.M., Durkin A.S., Torralba M., Sutton G., Buhay C.J., Ding Y., Dugan-Rocha S.P., Muzny D.M., Qin X., Gibbs R.A., Leigh S.R., Stumpf R., White B.A., Highlander S.K., Nelson K.E., Wilson B.A.
    PLoS ONE 5:E12411-E12411(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 409-05.

Entry informationi

Entry nameiD2RCL2_GARV4
AccessioniPrimary (citable) accession number: D2RCL2
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: September 3, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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