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D2RA89

- D2RA89_GARV4

UniProt

D2RA89 - D2RA89_GARV4

Protein
Submitted name:

Prephenate dehydrogenase

Gene

HMPREF0424_0483

Organism
Gardnerella vaginalis (strain 409-05)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (02 Mar 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. prephenate dehydrogenase (NADP+) activity Source: InterPro
    2. prephenate dehydrogenase activity Source: UniProtKB-EC

    GO - Biological processi

    1. tyrosine biosynthetic process Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseImported

    Enzyme and pathway databases

    BioCyciGVAG553190:GJPT-484-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Prephenate dehydrogenaseImported (EC:1.3.1.12Imported)
    Gene namesi
    Ordered Locus Names:HMPREF0424_0483Imported
    OrganismiGardnerella vaginalis (strain 409-05)Imported
    Taxonomic identifieri553190 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella
    ProteomesiUP000001888: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD2RA89.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000043495.
    KOiK04517.
    OMAiICELERY.
    OrthoDBiEOG6B8XMB.

    Family and domain databases

    Gene3Di3.40.50.720. 1 hit.
    InterProiIPR008927. 6-PGluconate_DH_C-like.
    IPR016040. NAD(P)-bd_dom.
    IPR003099. Prephen_DH.
    [Graphical view]
    PfamiPF02153. PDH. 1 hit.
    [Graphical view]
    SUPFAMiSSF48179. SSF48179. 1 hit.
    PROSITEiPS51176. PDH_ADH. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D2RA89-1 [UniParc]FASTAAdd to Basket

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    MVEDAEFSQK FSVGIVGLGL IGGSLAKRLA KLANCNVYAW NRHNEPYDEA    50
    KSLGITCVEK VQDLAKLRPN VLILCNALAA MPSILHEVAP YIDKSCTTIS 100
    DVGSVKTLVR EQVKDAGLQD CYVGAHPMAG SEFTGWKASS GELLNGALWA 150
    LTVDDSTEFW RVRNILQMIV SLCKNRAIVL DDATHDNSAA LISHMPHVVA 200
    TALANVLCEQ SNRAIALQLS AGSWRDMTRV ALTDPQRTRA MVSENRHNTA 250
    KLLRSVISEL TFAANMLDND VETADALEQE FFAKAQSWRE YKYLQRNSSK 300
    TSMQQSDAAN SRLWKYDSQI NWQQELLESA RLGESIVELS GFNINESSQL 350
    LLRSDASLRN V 361
    Length:361
    Mass (Da):39,937
    Last modified:March 2, 2010 - v1
    Checksum:i62E16A42F88A4305
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001849 Genomic DNA. Translation: ADB13786.1.
    RefSeqiYP_003373724.1. NC_013721.1.

    Genome annotation databases

    EnsemblBacteriaiADB13786; ADB13786; HMPREF0424_0483.
    GeneIDi8709101.
    KEGGigva:HMPREF0424_0483.
    PATRICi32146924. VBIGarVag136958_0436.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001849 Genomic DNA. Translation: ADB13786.1 .
    RefSeqi YP_003373724.1. NC_013721.1.

    3D structure databases

    ProteinModelPortali D2RA89.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADB13786 ; ADB13786 ; HMPREF0424_0483 .
    GeneIDi 8709101.
    KEGGi gva:HMPREF0424_0483.
    PATRICi 32146924. VBIGarVag136958_0436.

    Phylogenomic databases

    HOGENOMi HOG000043495.
    KOi K04517.
    OMAi ICELERY.
    OrthoDBi EOG6B8XMB.

    Enzyme and pathway databases

    BioCyci GVAG553190:GJPT-484-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.720. 1 hit.
    InterProi IPR008927. 6-PGluconate_DH_C-like.
    IPR016040. NAD(P)-bd_dom.
    IPR003099. Prephen_DH.
    [Graphical view ]
    Pfami PF02153. PDH. 1 hit.
    [Graphical view ]
    SUPFAMi SSF48179. SSF48179. 1 hit.
    PROSITEi PS51176. PDH_ADH. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential."
      Yeoman C.J., Yildirim S., Thomas S.M., Durkin A.S., Torralba M., Sutton G., Buhay C.J., Ding Y., Dugan-Rocha S.P., Muzny D.M., Qin X., Gibbs R.A., Leigh S.R., Stumpf R., White B.A., Highlander S.K., Nelson K.E., Wilson B.A.
      PLoS ONE 5:E12411-E12411(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 409-05Imported.

    Entry informationi

    Entry nameiD2RA89_GARV4
    AccessioniPrimary (citable) accession number: D2RA89
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 2, 2010
    Last sequence update: March 2, 2010
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3