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D2RA89

- D2RA89_GARV4

UniProt

D2RA89 - D2RA89_GARV4

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Protein
Submitted name: Prephenate dehydrogenase
Gene
HMPREF0424_0483
Organism
Gardnerella vaginalis (strain 409-05)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. prephenate dehydrogenase (NADP+) activity Source: InterPro
  2. prephenate dehydrogenase activity Source: UniProtKB-EC

GO - Biological processi

  1. tyrosine biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseImported

Enzyme and pathway databases

BioCyciGVAG553190:GJPT-484-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Prephenate dehydrogenaseImported (EC:1.3.1.12Imported)
Gene namesi
Ordered Locus Names:HMPREF0424_0483Imported
OrganismiGardnerella vaginalis (strain 409-05)Imported
Taxonomic identifieri553190 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella
ProteomesiUP000001888: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD2RA89.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000043495.
KOiK04517.
OMAiICELERY.
OrthoDBiEOG6B8XMB.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
InterProiIPR008927. 6-PGluconate_DH_C-like.
IPR016040. NAD(P)-bd_dom.
IPR003099. Prephen_DH.
[Graphical view]
PfamiPF02153. PDH. 1 hit.
[Graphical view]
SUPFAMiSSF48179. SSF48179. 1 hit.
PROSITEiPS51176. PDH_ADH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D2RA89-1 [UniParc]FASTAAdd to Basket

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MVEDAEFSQK FSVGIVGLGL IGGSLAKRLA KLANCNVYAW NRHNEPYDEA    50
KSLGITCVEK VQDLAKLRPN VLILCNALAA MPSILHEVAP YIDKSCTTIS 100
DVGSVKTLVR EQVKDAGLQD CYVGAHPMAG SEFTGWKASS GELLNGALWA 150
LTVDDSTEFW RVRNILQMIV SLCKNRAIVL DDATHDNSAA LISHMPHVVA 200
TALANVLCEQ SNRAIALQLS AGSWRDMTRV ALTDPQRTRA MVSENRHNTA 250
KLLRSVISEL TFAANMLDND VETADALEQE FFAKAQSWRE YKYLQRNSSK 300
TSMQQSDAAN SRLWKYDSQI NWQQELLESA RLGESIVELS GFNINESSQL 350
LLRSDASLRN V 361
Length:361
Mass (Da):39,937
Last modified:March 2, 2010 - v1
Checksum:i62E16A42F88A4305
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001849 Genomic DNA. Translation: ADB13786.1.
RefSeqiYP_003373724.1. NC_013721.1.

Genome annotation databases

EnsemblBacteriaiADB13786; ADB13786; HMPREF0424_0483.
GeneIDi8709101.
KEGGigva:HMPREF0424_0483.
PATRICi32146924. VBIGarVag136958_0436.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001849 Genomic DNA. Translation: ADB13786.1 .
RefSeqi YP_003373724.1. NC_013721.1.

3D structure databases

ProteinModelPortali D2RA89.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADB13786 ; ADB13786 ; HMPREF0424_0483 .
GeneIDi 8709101.
KEGGi gva:HMPREF0424_0483.
PATRICi 32146924. VBIGarVag136958_0436.

Phylogenomic databases

HOGENOMi HOG000043495.
KOi K04517.
OMAi ICELERY.
OrthoDBi EOG6B8XMB.

Enzyme and pathway databases

BioCyci GVAG553190:GJPT-484-MONOMER.

Family and domain databases

Gene3Di 3.40.50.720. 1 hit.
InterProi IPR008927. 6-PGluconate_DH_C-like.
IPR016040. NAD(P)-bd_dom.
IPR003099. Prephen_DH.
[Graphical view ]
Pfami PF02153. PDH. 1 hit.
[Graphical view ]
SUPFAMi SSF48179. SSF48179. 1 hit.
PROSITEi PS51176. PDH_ADH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential."
    Yeoman C.J., Yildirim S., Thomas S.M., Durkin A.S., Torralba M., Sutton G., Buhay C.J., Ding Y., Dugan-Rocha S.P., Muzny D.M., Qin X., Gibbs R.A., Leigh S.R., Stumpf R., White B.A., Highlander S.K., Nelson K.E., Wilson B.A.
    PLoS ONE 5:E12411-E12411(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 409-05.

Entry informationi

Entry nameiD2RA89_GARV4
AccessioniPrimary (citable) accession number: D2RA89
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: May 14, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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