D2RA89 (D2RA89_GARV4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Prephenate dehydrogenase EMBL ADB13786.1
EC=1.3.1.12 EMBL ADB13786.1

Gene names

Ordered Locus Names:

HMPREF0424_0483

Organism

Gardnerella vaginalis (strain 409-05) [Complete proteome] [HAMAP]

Taxonomic identifier

553190 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Gardnerella › Gardnerella vaginalis

Protein attributes

Sequence length	361 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Oxidoreductase EMBL ADB13786.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tyrosine biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	nucleotide binding Inferred from electronic annotation. Source: InterPro prephenate dehydrogenase (NADP+) activity Inferred from electronic annotation. Source: InterPro prephenate dehydrogenase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2RA89 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: 62E16A42F88A4305	FASTA	361	39,937
	10 20 30 40 50 60 MVEDAEFSQK FSVGIVGLGL IGGSLAKRLA KLANCNVYAW NRHNEPYDEA KSLGITCVEK 70 80 90 100 110 120 VQDLAKLRPN VLILCNALAA MPSILHEVAP YIDKSCTTIS DVGSVKTLVR EQVKDAGLQD 130 140 150 160 170 180 CYVGAHPMAG SEFTGWKASS GELLNGALWA LTVDDSTEFW RVRNILQMIV SLCKNRAIVL 190 200 210 220 230 240 DDATHDNSAA LISHMPHVVA TALANVLCEQ SNRAIALQLS AGSWRDMTRV ALTDPQRTRA 250 260 270 280 290 300 MVSENRHNTA KLLRSVISEL TFAANMLDND VETADALEQE FFAKAQSWRE YKYLQRNSSK 310 320 330 340 350 360 TSMQQSDAAN SRLWKYDSQI NWQQELLESA RLGESIVELS GFNINESSQL LLRSDASLRN V

References

[1]

"Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential." Yeoman C.J., Yildirim S., Thomas S.M., Durkin A.S., Torralba M., Sutton G., Buhay C.J., Ding Y., Dugan-Rocha S.P., Muzny D.M., Qin X., Gibbs R.A., Leigh S.R., Stumpf R., White B.A., Highlander S.K., Nelson K.E., Wilson B.A. PLoS ONE 5:E12411-E12411(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 409-05.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001849 Genomic DNA. Translation: ADB13786.1.
RefSeq	YP_003373724.1. NC_013721.1.
3D structure databases
ProteinModelPortal	D2RA89.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB13786; ADB13786; HMPREF0424_0483.
GeneID	8709101.
KEGG	gva:HMPREF0424_0483.
PATRIC	32146924. VBIGarVag136958_0436.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000043495.
KO	K04517.
OMA	ERWARIL.
Enzyme and pathway databases
BioCyc	GVAG553190:GJPT-484-MONOMER.
Family and domain databases
Gene3D	3.40.50.720. 1 hit.
InterPro	IPR008927. 6-PGluconate_DH_C-like. IPR016040. NAD(P)-bd_dom. IPR003099. Prephen_DH. [Graphical view]
Pfam	PF02153. PDH. 1 hit. [Graphical view]
SUPFAM	SSF48179. 6DGDH_C_like. 1 hit.
PROSITE	PS51176. PDH_ADH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2RA89_GARV4

Accession

Primary (citable) accession number: D2RA89

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)