D2R7U9 (D2R7U9_PIRSD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Exo-alpha-sialidase EMBL ADB19280.1
EC=3.2.1.18 EMBL ADB19280.1

Gene names

Ordered Locus Names:

Psta_4638

Organism

Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella staleyi) [Complete proteome] [HAMAP]

Taxonomic identifier

530564 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Planctomycetes › Planctomycetia › Planctomycetales › Planctomycetaceae › Pirellula › Pirellula staleyi

Protein attributes

Sequence length	417 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ADB19280.1
Molecular function	Glycosidase EMBL ADB19280.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	exo-alpha-(2->3)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->6)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->8)-sialidase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 32	32	Potential EMBL ADB19280.1
	Chain	33 – 417	385	Potential EMBL ADB19280.1		PRO_5000563911

Sequences

	Sequence		Length	Mass (Da)
	D2R7U9 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: 5C8164805E51E5F6	FASTA	417	45,310
	10 20 30 40 50 60 MSRHSSLQKL IFNSLCLTIL AVTIAPLGAT GEEPLTQVDV FEAGVGGYAM YRIPGVVVTP 70 80 90 100 110 120 KGTILAYCEA RRTGKSDWDE INILMRRSID GGKTFLEPQH VAHQGDKVPK NPLAIKQKLG 130 140 150 160 170 180 LQPEATVNNP VAVVDRKSGR ITMLYCVEYS RCFAMHSDDE GATFSKPRDI TAALEKLRQE 190 200 210 220 230 240 YPWFVVAIGP GHAIQLKNGR LVAAVWLSTG EGGHAHRPSV TTTLVSDDGG ETWSAGEIAA 250 260 270 280 290 300 RPTDTIVNPN ETTLAELSDG TVMLNIRSES KPNRRLITLS KNGSTGWSEP KFDEALVEPI 310 320 330 340 350 360 CMASLLAVPT REQQLLIYAG PDNLTSAKTK EPKPGTGRDR KNLTVQLSRD DGQTWTAKRV 370 380 390 400 410 LEPGPSAYSD LAVGPDGRVH CFFERCKAEG TGSPYARLSL VSFKPDWITQ PATATSK

References

[1]

"Complete genome sequence of Pirellula staleyi type strain (ATCC 27377)." Clum A., Tindall B.J., Sikorski J., Ivanova N., Mavrommatis K., Lucas S., Glavina del Rio T., Nolan M., Chen F., Tice H., Pitluck S., Cheng J.F., Chertkov O., Brettin T., Han C., Detter J.C., Kuske C., Bruce D. , Goodwin L., Ovchinikova G., Pati A., Mikhailova N., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P., Rohde M., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Lapidus A. Stand. Genomic Sci. 1:308-316(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 27377 / DSM 6068 / ICPB 4128.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001848 Genomic DNA. Translation: ADB19280.1.
RefSeq	YP_003373140.1. NC_013720.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB19280; ADB19280; Psta_4638.
GeneID	8708604.
KEGG	psl:Psta_4638.
PATRIC	32293236. VBIPirSta4342_4815.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000252336.
KO	K01186.
Enzyme and pathway databases
BioCyc	PSTA530564:GHPR-4689-MONOMER.
Family and domain databases
Gene3D	2.120.10.10. 1 hit.
InterPro	IPR026856. Sialidase_fam. IPR011040. Sialidases. [Graphical view]
PANTHER	PTHR10628. PTHR10628. 1 hit.
SUPFAM	SSF50939. Sialidase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D2R7U9_PIRSD

Accession

Primary (citable) accession number: D2R7U9

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)