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Protein
Submitted name:

3-carboxy-cis,cis-muconate cycloisomerase

Gene

Slin_1536

Organism
Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseImported

Enzyme and pathway databases

BioCyciSLIN504472:GHKB-1542-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
3-carboxy-cis,cis-muconate cycloisomeraseImported
Gene namesi
Ordered Locus Names:Slin_1536Imported
OrganismiSpirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)Imported
Taxonomic identifieri504472 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeSpirosoma
ProteomesiUP000002028 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi504472.Slin_1536.

Structurei

3D structure databases

ProteinModelPortaliD2QNX9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000033914.
KOiK01857.
OMAiHRATPMI.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR012789. Protocat_PcaB.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SMARTiSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR02426. protocat_pcaB. 1 hit.

Sequencei

Sequence statusi: Complete.

D2QNX9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLYSSLFYS PDMQSLLSEE TTVAHMLRFE AALATAQANN GLIPTPSAER
60 70 80 90 100
IAACCTVELL DWERLKKDIA LSGNAAIPLV KQLTEVVRKR DEEAAGFVHL
110 120 130 140 150
GATSQDVVDT ATVLTIKSVL DWLDDKLSAL ANRLIALTQA HRQTVMIGRT
160 170 180 190 200
LLQQAKPITF GLKTALWLDG LGRSQQRLAA CRQRVLVLQL AGAVGSRNAS
210 220 230 240 250
IPDAVHQETA NLLGLESSVS WHTQRDNIAE LAAVMGILSG SLAKIANDVM
260 270 280 290 300
LLMQTEIAEV LEGKAAGKGS SSTMPHKRNP VTTTAILANA NRVPNLVATM
310 320 330 340 350
LSAMPQEHER SAGRWHSEWD VLTDIMQLTA GSVERSLELL DNLEVDSQRM
360 370 380 390 400
RQNLELTNGL IYAETISLAL APKLGKATAH ELVEKACAVA IAEQKHLKDV
410 420 430
LREQAIDVAD LDKLFKPENS LGQALEIIDF ILHRFVHS
Length:438
Mass (Da):47,703
Last modified:March 2, 2010 - v1
Checksum:i3BB0BACD60EF97F8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001769 Genomic DNA. Translation: ADB37585.1.
RefSeqiWP_012926136.1. NC_013730.1.

Genome annotation databases

EnsemblBacteriaiADB37585; ADB37585; Slin_1536.
KEGGisli:Slin_1536.
PATRICi32432967. VBISpiLin97822_1534.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001769 Genomic DNA. Translation: ADB37585.1.
RefSeqiWP_012926136.1. NC_013730.1.

3D structure databases

ProteinModelPortaliD2QNX9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi504472.Slin_1536.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADB37585; ADB37585; Slin_1536.
KEGGisli:Slin_1536.
PATRICi32432967. VBISpiLin97822_1534.

Phylogenomic databases

HOGENOMiHOG000033914.
KOiK01857.
OMAiHRATPMI.

Enzyme and pathway databases

BioCyciSLIN504472:GHKB-1542-MONOMER.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
InterProiIPR019468. AdenyloSucc_lyase_C.
IPR024083. Fumarase/histidase_N.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
IPR012789. Protocat_PcaB.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10397. ADSL_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SMARTiSM00998. ADSL_C. 1 hit.
[Graphical view]
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR02426. protocat_pcaB. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33905 / DSM 74 / LMG 10896Imported.

Entry informationi

Entry nameiD2QNX9_SPILD
AccessioniPrimary (citable) accession number: D2QNX9
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: July 22, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.