D2QNX9 (D2QNX9_SPILD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
3-carboxy-cis,cis-muconate cycloisomerase EMBL ADB37585.1

Gene names

Ordered Locus Names:

Slin_1536 EMBL ADB37585.1

Organism

Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) [Complete proteome] [HAMAP] EMBL ADB37585.1

Taxonomic identifier

504472 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Spirosoma › Spirosoma linguale

Protein attributes

Sequence length	438 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Isomerase EMBL ADB37585.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	protocatechuate catabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	3-carboxy-cis,cis-muconate cycloisomerase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2QNX9 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: 3BB0BACD60EF97F8	FASTA	438	47,703
	10 20 30 40 50 60 MSLYSSLFYS PDMQSLLSEE TTVAHMLRFE AALATAQANN GLIPTPSAER IAACCTVELL 70 80 90 100 110 120 DWERLKKDIA LSGNAAIPLV KQLTEVVRKR DEEAAGFVHL GATSQDVVDT ATVLTIKSVL 130 140 150 160 170 180 DWLDDKLSAL ANRLIALTQA HRQTVMIGRT LLQQAKPITF GLKTALWLDG LGRSQQRLAA 190 200 210 220 230 240 CRQRVLVLQL AGAVGSRNAS IPDAVHQETA NLLGLESSVS WHTQRDNIAE LAAVMGILSG 250 260 270 280 290 300 SLAKIANDVM LLMQTEIAEV LEGKAAGKGS SSTMPHKRNP VTTTAILANA NRVPNLVATM 310 320 330 340 350 360 LSAMPQEHER SAGRWHSEWD VLTDIMQLTA GSVERSLELL DNLEVDSQRM RQNLELTNGL 370 380 390 400 410 420 IYAETISLAL APKLGKATAH ELVEKACAVA IAEQKHLKDV LREQAIDVAD LDKLFKPENS 430 LGQALEIIDF ILHRFVHS

References

[1]

"The complete chromosome of Spirosoma linguale DSM 74." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Mikhailova N., Ovchinnikova G., Saunders E., Brettin T., Detter J.C., Han C., Larimer F. , Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindal B., Schutze A., Schneider S., Goker M., Klenk H.-P., Eisen J.A. Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33905 / DSM 74 / LMG 10896.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001769 Genomic DNA. Translation: ADB37585.1.
RefSeq	YP_003386384.1. NC_013730.1.
3D structure databases
ProteinModelPortal	D2QNX9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB37585; ADB37585; Slin_1536.
GeneID	8725270.
KEGG	sli:Slin_1536.
PATRIC	32432967. VBISpiLin97822_1534.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000033914.
KO	K01857.
OMA	AEYVHRG.
Enzyme and pathway databases
BioCyc	SLIN504472:GHKB-1973-MONOMER.
Family and domain databases
Gene3D	1.10.275.10. 1 hit.
InterPro	IPR019468. AdenyloSucc_lyase_C. IPR003031. D_crystallin. IPR024083. Fumarase/histidase_N. IPR000362. Fumarate_lyase. IPR022761. Fumarate_lyase_N. IPR008948. L-Aspartase-like. IPR012789. Protocat_PcaB. [Graphical view]
Pfam	PF10397. ADSL_C. 1 hit. PF00206. Lyase_1. 1 hit. [Graphical view]
PRINTS	PR00145. ARGSUCLYASE. PR00149. FUMRATELYASE.
SMART	SM00998. ADSL_C. 1 hit. [Graphical view]
SUPFAM	SSF48557. L-Aspartase-like. 1 hit.
TIGRFAMs	TIGR02426. protocat_pcaB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D2QNX9_SPILD

Accession

Primary (citable) accession number: D2QNX9

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)