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D2QNF6

- D2QNF6_SPILD

UniProt

D2QNF6 - D2QNF6_SPILD

Protein
Submitted name:

Isocitrate dehydrogenase

Gene

Slin_3335

Organism
Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (02 Mar 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. isocitrate dehydrogenase (NADP+) activity Source: UniProtKB-EC
    2. magnesium ion binding Source: InterPro
    3. NAD binding Source: InterPro

    GO - Biological processi

    1. glyoxylate cycle Source: InterPro
    2. tricarboxylic acid cycle Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotationImported

    Enzyme and pathway databases

    BioCyciSLIN504472:GHKB-3360-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Isocitrate dehydrogenaseImported (EC:1.1.1.42Imported)
    Gene namesi
    Ordered Locus Names:Slin_3335Imported
    OrganismiSpirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)Imported
    Taxonomic identifieri504472 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeSpirosoma
    ProteomesiUP000002028: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD2QNF6.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the isocitrate and isopropylmalate dehydrogenases family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000021113.
    KOiK00031.
    OMAiIEFNERI.

    Family and domain databases

    Gene3Di3.40.718.10. 1 hit.
    InterProiIPR019818. IsoCit/isopropylmalate_DH_CS.
    IPR001804. Isocitrate/isopropylmalate_DH.
    IPR014273. Isocitrate_DH_aproteobac-typ.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view]
    PANTHERiPTHR11835. PTHR11835. 1 hit.
    PfamiPF00180. Iso_dh. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02924. ICDH_alpha. 1 hit.
    PROSITEiPS00470. IDH_IMDH. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D2QNF6-1 [UniParc]FASTAAdd to Basket

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    MSYSIPVTVA YGDGIGPEIM EATLRILEAA KAPLAYETIQ IGEKVYQSGH    50
    SAGIRPEAWE SLRRTKVFLK APITTPQGGG FKSLNVTTRK MLGLYANVRP 100
    CISYAPFVAT KHPTMDVVII RENEEDLYAG IEHQQTPEVV QCLKLISRPG 150
    CEKIVRYAFN YARQYGRSKV TCFTKDNIMK QTDGLFHQVF DEIAKEYPEI 200
    EAEHWIVDIG AAKLADTPEA FDVIVMPNLY GDILSDVAAQ IAGSVGLAGS 250
    SNIGEEVAMF EAIHGSAPRR AGQNLANPSG LLLGAIMMLV HLGEGEVASK 300
    VHNAWLKTLE DGIHTYDIYK ESVSTERVGT KEFADAVIAR MGQLPTQLKA 350
    VHYASVKAEP IKDKLSVRKP VTTETVGVDI FLYHEDRDAA LLGEGLKQYT 400
    AGPLSLSMIT NRGVKVWPDG FAETFCTDHW RCRFKAGDVN NVPYEEILQL 450
    QAKLTEAGYR IIKTENLCTF DGKPAFSAGQ GA 482
    Length:482
    Mass (Da):52,935
    Last modified:March 2, 2010 - v1
    Checksum:i344B51C0110A704D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001769 Genomic DNA. Translation: ADB39345.1.
    RefSeqiWP_012927866.1. NC_013730.1.
    YP_003388144.1. NC_013730.1.

    Genome annotation databases

    EnsemblBacteriaiADB39345; ADB39345; Slin_3335.
    GeneIDi8727088.
    KEGGisli:Slin_3335.
    PATRICi32436597. VBISpiLin97822_3332.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001769 Genomic DNA. Translation: ADB39345.1 .
    RefSeqi WP_012927866.1. NC_013730.1.
    YP_003388144.1. NC_013730.1.

    3D structure databases

    ProteinModelPortali D2QNF6.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADB39345 ; ADB39345 ; Slin_3335 .
    GeneIDi 8727088.
    KEGGi sli:Slin_3335.
    PATRICi 32436597. VBISpiLin97822_3332.

    Phylogenomic databases

    HOGENOMi HOG000021113.
    KOi K00031.
    OMAi IEFNERI.

    Enzyme and pathway databases

    BioCyci SLIN504472:GHKB-3360-MONOMER.

    Family and domain databases

    Gene3Di 3.40.718.10. 1 hit.
    InterProi IPR019818. IsoCit/isopropylmalate_DH_CS.
    IPR001804. Isocitrate/isopropylmalate_DH.
    IPR014273. Isocitrate_DH_aproteobac-typ.
    IPR024084. IsoPropMal-DH-like_dom.
    [Graphical view ]
    PANTHERi PTHR11835. PTHR11835. 1 hit.
    Pfami PF00180. Iso_dh. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02924. ICDH_alpha. 1 hit.
    PROSITEi PS00470. IDH_IMDH. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 33905 / DSM 74 / LMG 10896Imported.

    Entry informationi

    Entry nameiD2QNF6_SPILD
    AccessioniPrimary (citable) accession number: D2QNF6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 2, 2010
    Last sequence update: March 2, 2010
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3