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Protein
Submitted name:

Glycosyl hydrolase BNR repeat-containing protein

Gene

Slin_2629

Organism
Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciSLIN504472:GHKB-2590-MONOMER.

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl hydrolase BNR repeat-containing proteinImported
Gene namesi
Ordered Locus Names:Slin_2629Imported
OrganismiSpirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)Imported
Taxonomic identifieri504472 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeSpirosoma
Proteomesi
  • UP000002028 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi504472.Slin_2629.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini60 – 373SialidasesInterPro annotationAdd BLAST314

Phylogenomic databases

eggNOGiENOG4108478. Bacteria.
COG4409. LUCA.
HOGENOMiHOG000252336.
KOiK01186.
OMAiNGRRICV.
OrthoDBiPOG091H0EBR.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF13088. BNR_2. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

D2QHI6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLHSFLLAAS LSLSQPLPPA QGIRPDSTTN QPIAETTVFR NGEGGYLCYR
60 70 80 90 100
IPAIVKTPTG TLLAFAEGRR TDCGDFGDVD IVLRTSKDNG QSWSPIQTVV
110 120 130 140 150
DFGTMQAGNA APVFDVSDPR FPAGRLFLLY NTGTDSEANV RKGLAIREVW
160 170 180 190 200
YKTSTDGGQS WSEPVNITTQ VSRPNRPSVN PAYAFPEDWR SYANTPGHAL
210 220 230 240 250
QLQKGRYKGR IFVAANHSEG PPQQQFRDYR AHGFYSDDHG KTWKLSPTIP
260 270 280 290 300
YPGGNESTAA ETPGGGLLLN ARNQSGDVKN RLLAFSSNAG ESWEPVVVAT
310 320 330 340 350
DLPDPVCQGS MLNYQPRRGA YVLLFSNPNS QTSRTNLTVR VSRDGGKTWS
360 370 380 390
QGNSIYAGSS AYSDLVVQQD NTIGVLYEKD NYTKITYARF PYDWLVK
Length:397
Mass (Da):43,564
Last modified:March 2, 2010 - v1
Checksum:iB6BE26B4D5A2B257
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001769 Genomic DNA. Translation: ADB38646.1.

Genome annotation databases

EnsemblBacteriaiADB38646; ADB38646; Slin_2629.
KEGGisli:Slin_2629.
PATRICi32435177. VBISpiLin97822_2629.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001769 Genomic DNA. Translation: ADB38646.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi504472.Slin_2629.

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADB38646; ADB38646; Slin_2629.
KEGGisli:Slin_2629.
PATRICi32435177. VBISpiLin97822_2629.

Phylogenomic databases

eggNOGiENOG4108478. Bacteria.
COG4409. LUCA.
HOGENOMiHOG000252336.
KOiK01186.
OMAiNGRRICV.
OrthoDBiPOG091H0EBR.

Enzyme and pathway databases

BioCyciSLIN504472:GHKB-2590-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF13088. BNR_2. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiD2QHI6_SPILD
AccessioniPrimary (citable) accession number: D2QHI6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: November 2, 2016
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.