D2QHI6 (D2QHI6_SPILD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycosyl hydrolase BNR repeat-containing protein EMBL ADB38646.1

Gene names

Ordered Locus Names:

Slin_2629 EMBL ADB38646.1

Organism

Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) [Complete proteome] [HAMAP] EMBL ADB38646.1

Taxonomic identifier

504472 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Spirosoma › Spirosoma linguale

Protein attributes

Sequence length	397 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ADB38646.1
Molecular function	Hydrolase EMBL ADB38646.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	exo-alpha-sialidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 23	23	Potential EMBL ADB38646.1
	Chain	24 – 397	374	Potential		PRO_5000561488

Sequences

	Sequence		Length	Mass (Da)
	D2QHI6 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: B6BE26B4D5A2B257	FASTA	397	43,564
	10 20 30 40 50 60 MLHSFLLAAS LSLSQPLPPA QGIRPDSTTN QPIAETTVFR NGEGGYLCYR IPAIVKTPTG 70 80 90 100 110 120 TLLAFAEGRR TDCGDFGDVD IVLRTSKDNG QSWSPIQTVV DFGTMQAGNA APVFDVSDPR 130 140 150 160 170 180 FPAGRLFLLY NTGTDSEANV RKGLAIREVW YKTSTDGGQS WSEPVNITTQ VSRPNRPSVN 190 200 210 220 230 240 PAYAFPEDWR SYANTPGHAL QLQKGRYKGR IFVAANHSEG PPQQQFRDYR AHGFYSDDHG 250 260 270 280 290 300 KTWKLSPTIP YPGGNESTAA ETPGGGLLLN ARNQSGDVKN RLLAFSSNAG ESWEPVVVAT 310 320 330 340 350 360 DLPDPVCQGS MLNYQPRRGA YVLLFSNPNS QTSRTNLTVR VSRDGGKTWS QGNSIYAGSS 370 380 390 AYSDLVVQQD NTIGVLYEKD NYTKITYARF PYDWLVK

References

[1]

"The complete chromosome of Spirosoma linguale DSM 74." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Mikhailova N., Ovchinnikova G., Saunders E., Brettin T., Detter J.C., Han C., Larimer F. , Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindal B., Schutze A., Schneider S., Goker M., Klenk H.-P., Eisen J.A. Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 33905 / DSM 74 / LMG 10896.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001769 Genomic DNA. Translation: ADB38646.1.
RefSeq	YP_003387445.1. NC_013730.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB38646; ADB38646; Slin_2629.
GeneID	8726374.
KEGG	sli:Slin_2629.
PATRIC	32435177. VBISpiLin97822_2629.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000252336.
KO	K01186.
OMA	KGYQVEY.
Enzyme and pathway databases
BioCyc	SLIN504472:GHKB-2646-MONOMER.
Family and domain databases
Gene3D	2.120.10.10. 1 hit.
InterPro	IPR026856. Sialidase_fam. IPR011040. Sialidases. [Graphical view]
PANTHER	PTHR10628. PTHR10628. 1 hit.
SUPFAM	SSF50939. Sialidase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D2QHI6_SPILD

Accession

Primary (citable) accession number: D2QHI6

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 29, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)