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Protein
Submitted name:

Glycosyl hydrolase BNR repeat-containing protein

Gene

Slin_2629

Organism
Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciSLIN504472:GHKB-2646-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycosyl hydrolase BNR repeat-containing proteinImported
Gene namesi
Ordered Locus Names:Slin_2629Imported
OrganismiSpirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896)Imported
Taxonomic identifieri504472 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesCytophagiaCytophagalesCytophagaceaeSpirosoma
ProteomesiUP000002028 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2323 PotentialImportedAdd
BLAST
Chaini24 – 397374 PotentialImportedPRO_5000561488Add
BLAST

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

HOGENOMiHOG000252336.
KOiK01186.
OMAiWRSYANT.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

D2QHI6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLHSFLLAAS LSLSQPLPPA QGIRPDSTTN QPIAETTVFR NGEGGYLCYR
60 70 80 90 100
IPAIVKTPTG TLLAFAEGRR TDCGDFGDVD IVLRTSKDNG QSWSPIQTVV
110 120 130 140 150
DFGTMQAGNA APVFDVSDPR FPAGRLFLLY NTGTDSEANV RKGLAIREVW
160 170 180 190 200
YKTSTDGGQS WSEPVNITTQ VSRPNRPSVN PAYAFPEDWR SYANTPGHAL
210 220 230 240 250
QLQKGRYKGR IFVAANHSEG PPQQQFRDYR AHGFYSDDHG KTWKLSPTIP
260 270 280 290 300
YPGGNESTAA ETPGGGLLLN ARNQSGDVKN RLLAFSSNAG ESWEPVVVAT
310 320 330 340 350
DLPDPVCQGS MLNYQPRRGA YVLLFSNPNS QTSRTNLTVR VSRDGGKTWS
360 370 380 390
QGNSIYAGSS AYSDLVVQQD NTIGVLYEKD NYTKITYARF PYDWLVK
Length:397
Mass (Da):43,564
Last modified:March 2, 2010 - v1
Checksum:iB6BE26B4D5A2B257
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001769 Genomic DNA. Translation: ADB38646.1.
RefSeqiYP_003387445.1. NC_013730.1.

Genome annotation databases

EnsemblBacteriaiADB38646; ADB38646; Slin_2629.
KEGGisli:Slin_2629.
PATRICi32435177. VBISpiLin97822_2629.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001769 Genomic DNA. Translation: ADB38646.1.
RefSeqiYP_003387445.1. NC_013730.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADB38646; ADB38646; Slin_2629.
KEGGisli:Slin_2629.
PATRICi32435177. VBISpiLin97822_2629.

Phylogenomic databases

HOGENOMiHOG000252336.
KOiK01186.
OMAiWRSYANT.

Enzyme and pathway databases

BioCyciSLIN504472:GHKB-2646-MONOMER.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33905 / DSM 74 / LMG 10896Imported.

Entry informationi

Entry nameiD2QHI6_SPILD
AccessioniPrimary (citable) accession number: D2QHI6
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: April 29, 2015
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.