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D2Q947 (D2Q947_BIFDB) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length336 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionTransferase EMBL ADB09333.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcysteine biosynthetic process via cystathionine

Inferred from electronic annotation. Source: InterPro

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular_functionL-mimosine synthase activity

Inferred from electronic annotation. Source: UniProtKB-EC

cystathionine beta-synthase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D2Q947 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 2723187C57730A58

FASTA33636,363
        10         20         30         40         50         60 
MTIHDSLAEL IGNTPLVKLN HVTDGIKATI AVKVEYFNPG GSSKDRIAER IIDAAERSGE 

        70         80         90        100        110        120 
LKPGGVIVEP TSGNTGVGLA LVAQQRGYRT IFTLPDKVSE AKRAVLRAYG AEVVVTPTDA 

       130        140        150        160        170        180 
GPDDPRSYYQ VAERLAKAIP GGYRPNQYDN PNGPESHYHT TGPEIWQATD HKITHFVAGI 

       190        200        210        220        230        240 
GTGGTISGTG RYLKDVSDGA VQVIGADPEG SIYSNPDDVH QYKIEGVGED FYPKAFDRGL 

       250        260        270        280        290        300 
PDEIVQVNDA EAFEMTRRLA GEEGLLVGGS SGMAVVAAIK YAREHDLDER QTVVVLLPDS 

       310        320        330 
GRGYMEKIFD DDWMRANGFA DIVERTTKPS LAEQYL 

« Hide

References

[1]"The Bifidobacterium dentium Bd1 genome sequence reflects its genetic adaptation to the human oral cavity."
Ventura M., Turroni F., Zomer A., Foroni E., Giubellini V., Bottacini F., Canchaya C., Claesson M.J., He F., Mantzourani M., Mulas L., Ferrarini A., Gao B., Delledonne M., Henrissat B., Coutinho P., Oggioni M., Gupta R.S. expand/collapse author list , Zhang Z., Beighton D., Fitzgerald G.F., O'Toole P.W., van Sinderen D.
PLoS Genet. 5:E1000785-E1000785(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27534 / DSM 20436 / JCM 1195 / Bd1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001750 Genomic DNA. Translation: ADB09333.1.
RefSeqYP_003360157.1. NC_013714.1.

3D structure databases

ProteinModelPortalD2Q947.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB09333; ADB09333; BDP_0670.
GeneID8691489.
KEGGbde:BDP_0670.
PATRIC31955530. VBIBifDen66312_0642.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000217393.
KOK01697.
OMALRYCRAQ.
OrthoDBEOG6Q2SP8.

Enzyme and pathway databases

BioCycBDEN401473:GH09-659-MONOMER.

Family and domain databases

InterProIPR005857. Cysta_beta_synth.
IPR001926. Trp_syn_b_sub_like_PLP_eny_SF.
[Graphical view]
PfamPF00291. PALP. 1 hit.
[Graphical view]
SUPFAMSSF53686. SSF53686. 1 hit.
TIGRFAMsTIGR01137. cysta_beta. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD2Q947_BIFDB
AccessionPrimary (citable) accession number: D2Q947
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: May 14, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)