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D2Q6J8 (D2Q6J8_BIFDB) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length918 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. SAAS SAAS021135

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. SAAS SAAS021135

Cofactor

Magnesium By similarity. SAAS SAAS021135

Ontologies

Sequences

Sequence LengthMass (Da)Tools
D2Q6J8 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 4697F0908EB45C35

FASTA918102,758
        10         20         30         40         50         60 
MTTNDQQITP ADAAIVSSGT GTKGPEERDL PASLKEEMDL CLQILREVLG EFDEQLLASF 

        70         80         90        100        110        120 
DEVRGYALNA SAERFAGILT DTNPDQDDLQ NVVNTVDKLD MHDAQLLARA FATYFHLANL 

       130        140        150        160        170        180 
CEENYRVSVL HKRETAVDEN QAVDPVNEMT GAYHQLINEL GPAKARDLLD KLEFHPVFTA 

       190        200        210        220        230        240 
HPTEARRKAV EGKIRRISRL LEAHKLLGGS DKKENSRRLF NEIDALFRTS PIALKKPTPV 

       250        260        270        280        290        300 
EEADTILDIF DNTLFYTIPQ VYRRFDDWVL GDKAGLVPPM CPAFFHPGSW IGSDRDGNPN 

       310        320        330        340        350        360 
VTAKVSRQVA RKFSDHVLGA LEIETRTVGK NLTMEAGTTP PSDELKSLWN HQKEMSERLT 

       370        380        390        400        410        420 
DKAALISTKE MHRAVMLVMA DRLHYTIERD ADLMYHSCDE FLEDLKIVQR SLAAANAKRS 

       430        440        450        460        470        480 
AYGPVQDLIW QTETFGFHMV EMEFRQHSVV HSRALEDIRE HGLHGERGPL QPMTHEVLDT 

       490        500        510        520        530        540 
FRALGAIQKR NGIKAARRYI ISFTKSAQNI KDVYELNRLA FSHPEDVPTI DVIPLFEQLE 

       550        560        570        580        590        600 
DLQNSVDVLE DMIKIPEVQA RLKATGGKLE VMLGYSDSSK DAGPTSATLA LHSAQERIAK 

       610        620        630        640        650        660 
WAESHDIDLT LFHGRGGAVG RGGGPANRAV LAQPVGSVKC RFKLTEQGEV IFARYGNPAL 

       670        680        690        700        710        720 
AIRHVESVAA ATLLQSAPSV EKRNTDMTEK YADMANKLDE AAHNRFLDLL NTPDFAPWFS 

       730        740        750        760        770        780 
TVTPLTEIGL LPIGSRPAKR GLGAKSLDDL RTIPWIFSWA QARINLAAWY GLGTACEQFG 

       790        800        810        820        830        840 
DLKTLRQAYE EWPLFSTFID NIEMSLAKTD ERIAKMYLAL GDREDLNKKV LDEMELTREW 

       850        860        870        880        890        900 
VLKIVGDEWP LQHRHVLGQA IRIRSPYVDA LSVTQVLALG SLRKQVDKEE LTHGQQENYT 

       910 
YLILCTVSGV AAGLQNTG 

« Hide

References

[1]"The Bifidobacterium dentium Bd1 genome sequence reflects its genetic adaptation to the human oral cavity."
Ventura M., Turroni F., Zomer A., Foroni E., Giubellini V., Bottacini F., Canchaya C., Claesson M.J., He F., Mantzourani M., Mulas L., Ferrarini A., Gao B., Delledonne M., Henrissat B., Coutinho P., Oggioni M., Gupta R.S. expand/collapse author list , Zhang Z., Beighton D., Fitzgerald G.F., O'Toole P.W., van Sinderen D.
PLoS Genet. 5:E1000785-E1000785(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27534 / DSM 20436 / JCM 1195 / Bd1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001750 Genomic DNA. Translation: ADB08720.1.
RefSeqYP_003359544.1. NC_013714.1.

3D structure databases

ProteinModelPortalD2Q6J8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB08720; ADB08720; BDP_0023.
GeneID8690854.
KEGGbde:BDP_0023.
PATRIC31954242. VBIBifDen66312_0021.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000238647.
KOK01595.
OMAAIPWVFG.
OrthoDBEOG6TJ7T8.

Enzyme and pathway databases

BioCycBDEN401473:GH09-24-MONOMER.

Family and domain databases

InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2Q6J8_BIFDB
AccessionPrimary (citable) accession number: D2Q6J8
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: November 13, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)