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D2Q6C3

- D2Q6C3_BIFDB

UniProt

D2Q6C3 - D2Q6C3_BIFDB

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Protein

Beta-galactosidase

Gene

BDP_1908

Organism
Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei122 – 1221Substrate
Binding sitei160 – 1601Substrate
Active sitei161 – 1611Proton donorUniRule annotation
Active sitei320 – 3201NucleophileUniRule annotation
Binding sitei328 – 3281SubstrateUniRule annotation

GO - Molecular functioni

  1. beta-galactosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Enzyme and pathway databases

BioCyciBDEN401473:GH09-1843-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
Short name:
Beta-galUniRule annotation
Gene namesi
Ordered Locus Names:BDP_1908Imported
OrganismiBifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1)Imported
Taxonomic identifieri401473 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000008693: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. beta-galactosidase complex Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliD2Q6C3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 42 family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000117811.
KOiK12308.
OMAiRIQPTED.
OrthoDBiEOG6GTZGG.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
3.40.50.880. 1 hit.
InterProiIPR013738. Beta_galactosidase_Trimer.
IPR029062. Class_I_gatase-like.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamiPF02449. Glyco_hydro_42. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view]
PIRSFiPIRSF001084. B-galactosidase. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF52317. SSF52317. 1 hit.

Sequencei

Sequence statusi: Complete.

D2Q6C3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTTRRTFSWP RLLTRNGGGI AFGGDYNPDQ WSEEIWDDDI RLMKQAGVNT
60 70 80 90 100
VALAIFSWDR IQPTEDRWNF GWLDRIIDKL GKAGIAVDLA SATATAPLWL
110 120 130 140 150
YESHPEVLPR DKYGHQVNAG SRQSWSPTSP VFKTYALTMC RKLAERYGDN
160 170 180 190 200
PYVTAWHMGN EYGWNNREDY SDNALAAFRK WCERKYGTVD ALNAAWGTTF
210 220 230 240 250
WGQEMNGFDE VLIPRFMGTD SMVNPGQKLD FERFGNDMLL DFYKAERDAI
260 270 280 290 300
AEICPDKPFT TNFMVSTDQC CMDYADWAEE VDFVSNDHYF HEGESHLDEL
310 320 330 340 350
ACSDALMDSL ALGKPWYVME HSTSAVQWKP LNIRKRKGEI VRDSLAHVAM
360 370 380 390 400
GADAINFFQW RASAFGSEAF HSAMLPHAGE DTRVFRQVCE LGSVLKDLSA
410 420 430 440 450
AGMQGSTLER SDTAILFSAE SEWATRSETL PSMKLSHWHD VRDWYRAFLD
460 470 480 490 500
AGQRADVVPL KYDWSAYSVV VLPSVLMLSA ADTQRLADFT AAGGQVVIGY
510 520 530 540 550
ATGLIDEHFH TWLGGYPGAG NGLLRKMLGI RGEEFNILGC EAEGEPCEIE
560 570 580 590 600
LGGGMDGAVT RLWQNDVNVE GPDTEVLATY SGKSADEWEL DGTAAITRNP
610 620 630 640 650
YGAGAAYFVG CDLNVADLTR FVRANLTTSG GEDDPRYGDV LHTVRKSADA
660 670 680 690 700
TFDFYMPRGK QEVTLRGIEG EPICQFHSEA GPEGPGSYVI HRNGMLITRR
Length:700
Mass (Da):78,202
Last modified:March 2, 2010 - v1
Checksum:i6E66AF4CEC6F5E51
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001750 Genomic DNA. Translation: ADB10488.1.
RefSeqiYP_003361312.1. NC_013714.1.

Genome annotation databases

EnsemblBacteriaiADB10488; ADB10488; BDP_1908.
GeneIDi8692673.
KEGGibde:BDP_1908.
PATRICi31957913. VBIBifDen66312_1804.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001750 Genomic DNA. Translation: ADB10488.1 .
RefSeqi YP_003361312.1. NC_013714.1.

3D structure databases

ProteinModelPortali D2Q6C3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADB10488 ; ADB10488 ; BDP_1908 .
GeneIDi 8692673.
KEGGi bde:BDP_1908.
PATRICi 31957913. VBIBifDen66312_1804.

Phylogenomic databases

HOGENOMi HOG000117811.
KOi K12308.
OMAi RIQPTED.
OrthoDBi EOG6GTZGG.

Enzyme and pathway databases

BioCyci BDEN401473:GH09-1843-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
3.40.50.880. 1 hit.
InterProi IPR013738. Beta_galactosidase_Trimer.
IPR029062. Class_I_gatase-like.
IPR003476. Glyco_hydro_42.
IPR013529. Glyco_hydro_42_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
Pfami PF02449. Glyco_hydro_42. 1 hit.
PF08532. Glyco_hydro_42M. 1 hit.
[Graphical view ]
PIRSFi PIRSF001084. B-galactosidase. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF52317. SSF52317. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27534 / DSM 20436 / JCM 1195 / Bd1Imported.

Entry informationi

Entry nameiD2Q6C3_BIFDB
AccessioniPrimary (citable) accession number: D2Q6C3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 1, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3