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D2Q6C3

- D2Q6C3_BIFDB

UniProt

D2Q6C3 - D2Q6C3_BIFDB

Protein

Beta-galactosidase

Gene

BDP_1908

Organism
Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (02 Mar 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei122 – 1221Substrate
    Binding sitei160 – 1601Substrate
    Active sitei161 – 1611Proton donorUniRule annotation
    Active sitei320 – 3201NucleophileUniRule annotation
    Binding sitei328 – 3281SubstrateUniRule annotation

    GO - Molecular functioni

    1. beta-galactosidase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Enzyme and pathway databases

    BioCyciBDEN401473:GH09-1843-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Beta-galactosidaseUniRule annotation (EC:3.2.1.23UniRule annotation)
    Short name:
    Beta-galUniRule annotation
    Gene namesi
    Ordered Locus Names:BDP_1908Imported
    OrganismiBifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1)Imported
    Taxonomic identifieri401473 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
    ProteomesiUP000008693: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. beta-galactosidase complex Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliD2Q6C3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 42 family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000117811.
    KOiK12308.
    OMAiRIQPTED.
    OrthoDBiEOG6GTZGG.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProiIPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PfamiPF02449. Glyco_hydro_42. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001084. B-galactosidase. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D2Q6C3-1 [UniParc]FASTAAdd to Basket

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    MTTRRTFSWP RLLTRNGGGI AFGGDYNPDQ WSEEIWDDDI RLMKQAGVNT    50
    VALAIFSWDR IQPTEDRWNF GWLDRIIDKL GKAGIAVDLA SATATAPLWL 100
    YESHPEVLPR DKYGHQVNAG SRQSWSPTSP VFKTYALTMC RKLAERYGDN 150
    PYVTAWHMGN EYGWNNREDY SDNALAAFRK WCERKYGTVD ALNAAWGTTF 200
    WGQEMNGFDE VLIPRFMGTD SMVNPGQKLD FERFGNDMLL DFYKAERDAI 250
    AEICPDKPFT TNFMVSTDQC CMDYADWAEE VDFVSNDHYF HEGESHLDEL 300
    ACSDALMDSL ALGKPWYVME HSTSAVQWKP LNIRKRKGEI VRDSLAHVAM 350
    GADAINFFQW RASAFGSEAF HSAMLPHAGE DTRVFRQVCE LGSVLKDLSA 400
    AGMQGSTLER SDTAILFSAE SEWATRSETL PSMKLSHWHD VRDWYRAFLD 450
    AGQRADVVPL KYDWSAYSVV VLPSVLMLSA ADTQRLADFT AAGGQVVIGY 500
    ATGLIDEHFH TWLGGYPGAG NGLLRKMLGI RGEEFNILGC EAEGEPCEIE 550
    LGGGMDGAVT RLWQNDVNVE GPDTEVLATY SGKSADEWEL DGTAAITRNP 600
    YGAGAAYFVG CDLNVADLTR FVRANLTTSG GEDDPRYGDV LHTVRKSADA 650
    TFDFYMPRGK QEVTLRGIEG EPICQFHSEA GPEGPGSYVI HRNGMLITRR 700
    Length:700
    Mass (Da):78,202
    Last modified:March 2, 2010 - v1
    Checksum:i6E66AF4CEC6F5E51
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001750 Genomic DNA. Translation: ADB10488.1.
    RefSeqiYP_003361312.1. NC_013714.1.

    Genome annotation databases

    EnsemblBacteriaiADB10488; ADB10488; BDP_1908.
    GeneIDi8692673.
    KEGGibde:BDP_1908.
    PATRICi31957913. VBIBifDen66312_1804.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001750 Genomic DNA. Translation: ADB10488.1 .
    RefSeqi YP_003361312.1. NC_013714.1.

    3D structure databases

    ProteinModelPortali D2Q6C3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADB10488 ; ADB10488 ; BDP_1908 .
    GeneIDi 8692673.
    KEGGi bde:BDP_1908.
    PATRICi 31957913. VBIBifDen66312_1804.

    Phylogenomic databases

    HOGENOMi HOG000117811.
    KOi K12308.
    OMAi RIQPTED.
    OrthoDBi EOG6GTZGG.

    Enzyme and pathway databases

    BioCyci BDEN401473:GH09-1843-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    3.40.50.880. 1 hit.
    InterProi IPR013738. Beta_galactosidase_Trimer.
    IPR029062. Class_I_gatase-like.
    IPR003476. Glyco_hydro_42.
    IPR013529. Glyco_hydro_42_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    Pfami PF02449. Glyco_hydro_42. 1 hit.
    PF08532. Glyco_hydro_42M. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001084. B-galactosidase. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF52317. SSF52317. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 27534 / DSM 20436 / JCM 1195 / Bd1Imported.

    Entry informationi

    Entry nameiD2Q6C3_BIFDB
    AccessioniPrimary (citable) accession number: D2Q6C3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 2, 2010
    Last sequence update: March 2, 2010
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3