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D2Q5X3

- D2Q5X3_BIFDB

UniProt

D2Q5X3 - D2Q5X3_BIFDB

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Protein
Submitted name: GadB glutamate decarboxylase
Gene
gadB, BDP_1749
Organism
Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

Cofactori

Pyridoxal phosphate By similarity.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciBDEN401473:GH09-1693-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
GadB glutamate decarboxylaseImported (EC:4.1.1.15Imported)
Gene namesi
Name:gadBImported
Ordered Locus Names:BDP_1749Imported
OrganismiBifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1)Imported
Taxonomic identifieri401473 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000008693: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD2Q5X3.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.
OMAiMIGRLFN.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

D2Q5X3-1 [UniParc]FASTAAdd to Basket

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MSIMHSNINT IAAGYGYSGG ADSDSVEVNP LFARPKEAKA FSKFKIPQEG    50
SLPETAYQVV HDDAMLDGNA RLNLATFVST WMDDYANRLY MEAADKNMID 100
KDEYPKTAEV ESRCWHMLAD LWHAPDPMNT IGTSTIGSSE ACMLGGLALK 150
RRWKEAREKA GLPADRPNLV MSSAVQVCWE KFCNYFDVEP RYVPISEEHK 200
VLDGYDLDKY VDENTIGVVA IMGVTYTGMY EPVKKISDAL DRIEERTGLD 250
VRIHVDAASG GMIAPFIQPD LQWDFRVKRV YSISTSGHKY GLVYPGLGWV 300
VWRETADLPE SLIFKVSYLG GEMPTFALNF SRPGAQVLLQ YYMFLRLGFE 350
GYRRVQQAAH DVAKYLSGEI AKMDDFTLWN DGSDIPVFAW MLKDKPDRKW 400
NLYDLQDRLR MKGWLVPAYP MPVDLTQVTV QRIVVRNGFS HDMAESFLKD 450
LKACVKYLDG LKAPMPSEAR VSGFHH 476
Length:476
Mass (Da):53,864
Last modified:March 2, 2010 - v1
Checksum:i8E97A12B3159B6FC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001750 Genomic DNA. Translation: ADB10338.1.
RefSeqiYP_003361162.1. NC_013714.1.

Genome annotation databases

EnsemblBacteriaiADB10338; ADB10338; BDP_1749.
GeneIDi8692523.
KEGGibde:BDP_1749.
PATRICi31957611. VBIBifDen66312_1653.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001750 Genomic DNA. Translation: ADB10338.1 .
RefSeqi YP_003361162.1. NC_013714.1.

3D structure databases

ProteinModelPortali D2Q5X3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADB10338 ; ADB10338 ; BDP_1749 .
GeneIDi 8692523.
KEGGi bde:BDP_1749.
PATRICi 31957611. VBIBifDen66312_1653.

Phylogenomic databases

HOGENOMi HOG000070228.
KOi K01580.
OMAi MIGRLFN.
OrthoDBi EOG6TFCPW.

Enzyme and pathway databases

BioCyci BDEN401473:GH09-1693-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27534 / DSM 20436 / JCM 1195 / Bd1.

Entry informationi

Entry nameiD2Q5X3_BIFDB
AccessioniPrimary (citable) accession number: D2Q5X3
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: May 14, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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