D2Q4U4 (D2Q4U4_KRIFD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase, E1 subunit EMBL ADB34199.1

Gene names

Ordered Locus Names:

Kfla_5184

Organism

Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) [Complete proteome] [HAMAP]

Taxonomic identifier

479435 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Propionibacterineae › Nocardioidaceae › Kribbella › Kribbella flavida

Protein attributes

Sequence length	1285 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: InterPro thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring acyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2Q4U4 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: 870E6A9418019FA0	FASTA	1,285	141,182
	10 20 30 40 50 60 MATEPSDTNP LAAFGSNEWL VDEMYEKYQQ DPKSVDPAWQ TYFESDGFKG SGPGDAKPVT 70 80 90 100 110 120 TGPADAPRPD AVSDNKTPEA AVRGTTATAP AASKPAAQAA ARTPEQAAPP TTASTAQPAQ 130 140 150 160 170 180 SRPAQTQPPA SAQQTAPAAS GAPTGGTVNQ PPSAQPKPAP ATSTDAERKV LRGAPARTAQ 190 200 210 220 230 240 NMETSLQVPT ATSVRQVPVK LLIDNRIVIN NHLKRARGGK ISFTHLIGWA LVKALKTLPE 250 260 270 280 290 300 MNASYDETEG KPTLVQPAHI NLGLAIDMAK PDGTRQLLVP SIKAAETMTF AEFWMAYEDI 310 320 330 340 350 360 VRRARDNKLA LPDFQGTTIS LTNPGTIGTQ HSVPRLMSGQ GCIIGVGAME YPPEYQGAAE 370 380 390 400 410 420 ETMAKLAVSK VMTLTSTYDH RIIQGAQSGE FLRKIHQLLL GEEGFYDEIF QSLRIPYEPI 430 440 450 460 470 480 RWAADLPHSH EEDISKQARI LELIHAYRVR GHIMADTDPL EYKQRSHPDL DVATHGLTLW 490 500 510 520 530 540 DLDREFATGS FGAATDRRFM KLREILGILR DSYCRTTGVE YMHIQDPEQR KWLQERIERP 550 560 570 580 590 600 HTKPPREEQL RILAKLNEAE AFETFLQTKY VGQKRFSLEG GETTIPLLDE LCEEAAGAGL 610 620 630 640 650 660 DEVVIGMAHR GRLNVLANIV GKSYGQIFRE FDGNIDPRTV QGSGDVKYHL GAEGEFVSEF 670 680 690 700 710 720 GDKIKVSVAA NPSHLETVDP VLEGIVRAKQ DILDRGAAFP VLPVLVHGDA AFAGQGVVAE 730 740 750 760 770 780 TLNLSQLRGY RTGGTIHVIV NNQVGFTTSP ASSRSSMYCT DVARMVQAPI FHVNGDDPEA 790 800 810 820 830 840 CIRVASLAFE YRQAFNKDVV IDLVCYRRRG HNEGDDPSFT QPLMYDLIEQ KRSVRKLYTE 850 860 870 880 890 900 ALIGRGDITV EEAEQAMRDF QQRLERVFTE VREAKSQPDT PAPYVTVPVY PDKPEGPDAT 910 920 930 940 950 960 ATTPEVLKKI ADAYTTLPEG FTAHPKVLPQ LQRRAAAITQ GPVDWASAEI TAFGSLLLAG 970 980 990 1000 1010 1020 RPVRLAGQDS RRGTFVQRFA AIIDRVNGQD HVPLQHLGED QANFYVYDSL LSEYAALGFE 1030 1040 1050 1060 1070 1080 YGYSVARPDA LVLWEAQFGD FVNGAQSIID EYISAGEAKW GQKSGVVLLL PHGYEGQGPD 1090 1100 1110 1120 1130 1140 HSSARIERFL TLCAENAMTV AQPSTPASYF HLLRRHTLQE EHNPLIVFTP KQLLRRKEAV 1150 1160 1170 1180 1190 1200 SQPEELTSGS FRPVLNDSDA EQNPATVERV ILASGRISYD LLAERKKVEP DKISTAVLRV 1210 1220 1230 1240 1250 1260 EQLYPLPTEQ IKAELAKYPN ATEIRWVQDE PANQGPWPFM ALNLTEHLGG KPFYRVSRPA 1270 1280 MSAPSVGSMG VHQAEQATLL KQAFS

References

[1]

"The complete genome of Kribbella flavida DSM 17836." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M. , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Pukall R., Klenk H.-P., Eisen J.A. Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 17836 / JCM 10339 / NBRC 14399.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001736 Genomic DNA. Translation: ADB34199.1.
RefSeq	YP_003382998.1. NC_013729.1.
3D structure databases
ProteinModelPortal	D2Q4U4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB34199; ADB34199; Kfla_5184.
GeneID	8721805.
KEGG	kfl:Kfla_5184.
PATRIC	32240851. VBIKriFla67707_5181.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000259587.
KO	K00164.
OMA	SAGEAKW.
Enzyme and pathway databases
BioCyc	KFLA479435:GI0F-5227-MONOMER.
Family and domain databases
Gene3D	3.30.559.10. 1 hit.
InterPro	IPR001078. 2-oxoacid_DH_actylTfrase. IPR011603. 2oxoglutarate_DH_E1. IPR023213. CAT-like_dom. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D2Q4U4_KRIFD

Accession

Primary (citable) accession number: D2Q4U4

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)