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D2Q4U4 (D2Q4U4_KRIFD) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Kfla_5184 EMBL ADB34199.1
OrganismKribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) [Complete proteome] [HAMAP] EMBL ADB34199.1
Taxonomic identifier479435 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaeNocardioidaceaeKribbella

Protein attributes

Sequence length1285 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
D2Q4U4 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 870E6A9418019FA0

FASTA1,285141,182
        10         20         30         40         50         60 
MATEPSDTNP LAAFGSNEWL VDEMYEKYQQ DPKSVDPAWQ TYFESDGFKG SGPGDAKPVT 

        70         80         90        100        110        120 
TGPADAPRPD AVSDNKTPEA AVRGTTATAP AASKPAAQAA ARTPEQAAPP TTASTAQPAQ 

       130        140        150        160        170        180 
SRPAQTQPPA SAQQTAPAAS GAPTGGTVNQ PPSAQPKPAP ATSTDAERKV LRGAPARTAQ 

       190        200        210        220        230        240 
NMETSLQVPT ATSVRQVPVK LLIDNRIVIN NHLKRARGGK ISFTHLIGWA LVKALKTLPE 

       250        260        270        280        290        300 
MNASYDETEG KPTLVQPAHI NLGLAIDMAK PDGTRQLLVP SIKAAETMTF AEFWMAYEDI 

       310        320        330        340        350        360 
VRRARDNKLA LPDFQGTTIS LTNPGTIGTQ HSVPRLMSGQ GCIIGVGAME YPPEYQGAAE 

       370        380        390        400        410        420 
ETMAKLAVSK VMTLTSTYDH RIIQGAQSGE FLRKIHQLLL GEEGFYDEIF QSLRIPYEPI 

       430        440        450        460        470        480 
RWAADLPHSH EEDISKQARI LELIHAYRVR GHIMADTDPL EYKQRSHPDL DVATHGLTLW 

       490        500        510        520        530        540 
DLDREFATGS FGAATDRRFM KLREILGILR DSYCRTTGVE YMHIQDPEQR KWLQERIERP 

       550        560        570        580        590        600 
HTKPPREEQL RILAKLNEAE AFETFLQTKY VGQKRFSLEG GETTIPLLDE LCEEAAGAGL 

       610        620        630        640        650        660 
DEVVIGMAHR GRLNVLANIV GKSYGQIFRE FDGNIDPRTV QGSGDVKYHL GAEGEFVSEF 

       670        680        690        700        710        720 
GDKIKVSVAA NPSHLETVDP VLEGIVRAKQ DILDRGAAFP VLPVLVHGDA AFAGQGVVAE 

       730        740        750        760        770        780 
TLNLSQLRGY RTGGTIHVIV NNQVGFTTSP ASSRSSMYCT DVARMVQAPI FHVNGDDPEA 

       790        800        810        820        830        840 
CIRVASLAFE YRQAFNKDVV IDLVCYRRRG HNEGDDPSFT QPLMYDLIEQ KRSVRKLYTE 

       850        860        870        880        890        900 
ALIGRGDITV EEAEQAMRDF QQRLERVFTE VREAKSQPDT PAPYVTVPVY PDKPEGPDAT 

       910        920        930        940        950        960 
ATTPEVLKKI ADAYTTLPEG FTAHPKVLPQ LQRRAAAITQ GPVDWASAEI TAFGSLLLAG 

       970        980        990       1000       1010       1020 
RPVRLAGQDS RRGTFVQRFA AIIDRVNGQD HVPLQHLGED QANFYVYDSL LSEYAALGFE 

      1030       1040       1050       1060       1070       1080 
YGYSVARPDA LVLWEAQFGD FVNGAQSIID EYISAGEAKW GQKSGVVLLL PHGYEGQGPD 

      1090       1100       1110       1120       1130       1140 
HSSARIERFL TLCAENAMTV AQPSTPASYF HLLRRHTLQE EHNPLIVFTP KQLLRRKEAV 

      1150       1160       1170       1180       1190       1200 
SQPEELTSGS FRPVLNDSDA EQNPATVERV ILASGRISYD LLAERKKVEP DKISTAVLRV 

      1210       1220       1230       1240       1250       1260 
EQLYPLPTEQ IKAELAKYPN ATEIRWVQDE PANQGPWPFM ALNLTEHLGG KPFYRVSRPA 

      1270       1280 
MSAPSVGSMG VHQAEQATLL KQAFS 

« Hide

References

[1]"The complete genome of Kribbella flavida DSM 17836."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M. expand/collapse author list , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Pukall R., Klenk H.-P., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17836 / JCM 10339 / NBRC 14399.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001736 Genomic DNA. Translation: ADB34199.1.
RefSeqYP_003382998.1. NC_013729.1.

3D structure databases

ProteinModelPortalD2Q4U4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB34199; ADB34199; Kfla_5184.
GeneID8721805.
KEGGkfl:Kfla_5184.
PATRIC32240851. VBIKriFla67707_5181.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000259587.
KOK00164.
OMAHILRRQL.

Enzyme and pathway databases

BioCycKFLA479435:GI0F-5228-MONOMER.

Family and domain databases

Gene3D3.30.559.10. 1 hit.
InterProIPR001078. 2-oxoacid_DH_actylTfrase.
IPR011603. 2oxoglutarate_DH_E1.
IPR023213. CAT-like_dom.
IPR001017. DH_E1.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00198. 2-oxoacid_dh. 1 hit.
PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD2Q4U4_KRIFD
AccessionPrimary (citable) accession number: D2Q4U4
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 16, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)