D2PZ81 (D2PZ81_KRIFD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Carbohydrate binding family 6 EMBL ADB33690.1

Gene names

Ordered Locus Names:

Kfla_4672

Organism

Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) [Complete proteome] [HAMAP]

Taxonomic identifier

479435 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Propionibacterineae › Nocardioidaceae › Kribbella › Kribbella flavida

Protein attributes

Sequence length	959 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ADB33690.1
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 28	28	Potential EMBL ADB33690.1
	Chain	29 – 959	931	Potential EMBL ADB33690.1		PRO_5000560564

Sequences

	Sequence		Length	Mass (Da)
	D2PZ81 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: DA2BBA3383BA8618	FASTA	959	98,349
	10 20 30 40 50 60 MPRFRSLAAL VVAALTLTGT TVPAAHAAYS ITVEAENAVL AGGAVAQTEH SGYSGSAYVG 70 80 90 100 110 120 GFTDPNKGTA AVTATVAPPS TGSYRLALRY ANGTGSAKTL SLYVGGAKVQ QVTLPATSGW 130 140 150 160 170 180 AGWGEVSTTL SLTAGAKSIA YRFDASDSGN VNLDKLIVTD APAAAEGTQE AENAVLSGGA 190 200 210 220 230 240 TVSTGHAGYT GTGFVGGYTD GNKGNAATTF SVNSAKSGSG TATLRYANGT GVAMTLSLYV 250 260 270 280 290 300 RGTKLRQISL PPTSGWASWG TSAESVPLIA GANTIAYRFD ASDSGNVNLD NLTVTPPTDV 310 320 330 340 350 360 PPADGAGLEG GFLSGGASVG TSISGFAGSG YVTGFTTVGS RVIRTVKLNA AGNAATTLRY 370 380 390 400 410 420 SNPTGSTKTL SVYANGVRVG QVSLPAASGW STVQQALPLR AGLNLIGYQY DSGDSGNVSL 430 440 450 460 470 480 DDLTVTGSAA LATRGATVAY TEYEAENSST NGTVLGPDRT YRTIPSESSG RRAVRLDNAG 490 500 510 520 530 540 KYAQFTLTQP TNSLVVRYSI PDNAAGTGIT APLGIYVGGA KVKDVTLTSA YSWVYGNYPF 550 560 570 580 590 600 PNDPALGNGH RFYDEVRTTL PNYPAGTVLR LQNDTGTPIT VDLIDTEVVA PALTAPAGAL 610 620 630 640 650 660 DVTAYGAVPG SGDDTAAFGT AISAAKAQGK PLWVPAGTFD LTNRLNVDNV AVRGAGMWHT 670 680 690 700 710 720 TIRGNNGLGG FLGTGSAIQL ADFTFAGDVR HRDPDGVVTT HAAMQGDFGT GSLIHNVWVE 730 740 750 760 770 780 HAKVGLWVNN ANGLYVAGVR IRNTFADGVN LNDTVSSSRV DQSVLRNTGD DALAMWSYSA 790 800 810 820 830 840 SVTNCAFTFN TATLPALANT AGIYGGNGNR IEDNLFSDTV YTASGITVST WHGAQPFAGT 850 860 870 880 890 900 TVVQRNTITR AGGFNTDWNS SQGALWIYAE SRDISAPVLI KDVDIVDSTY QGILLTWQRP 910 920 930 940 950 ITNITFDRVK VSGAGTYGIE ILSPGSGTFN YVTVAGAAAG GLNNTTGFTL HRGPGNSGF

References

[1]

"The complete genome of Kribbella flavida DSM 17836." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M. , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Pukall R., Klenk H.-P., Eisen J.A. Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 17836 / JCM 10339 / NBRC 14399.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001736 Genomic DNA. Translation: ADB33690.1.
RefSeq	YP_003382489.1. NC_013729.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB33690; ADB33690; Kfla_4672.
GeneID	8721287.
KEGG	kfl:Kfla_4672.
PATRIC	32239793. VBIKriFla67707_4658.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000049802.
OMA	GGYTDAN.
Enzyme and pathway databases
BioCyc	KFLA479435:GI0F-4709-MONOMER.
Family and domain databases
Gene3D	2.160.20.10. 1 hit.
InterPro	IPR005084. CMB_fam6. IPR008979. Galactose-bd-like. IPR006626. PbH1. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Pfam	PF03422. CBM_6. 3 hits. [Graphical view]
SMART	SM00710. PbH1. 9 hits. [Graphical view]
SUPFAM	SSF49785. Gal_bind_like. 3 hits. SSF51126. Pectin_lyas_like. 1 hit.
PROSITE	PS51175. CBM6. 3 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2PZ81_KRIFD

Accession

Primary (citable) accession number: D2PZ81

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)