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D2PU34 (D2PU34_KRIFD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Kfla_6082 EMBL ADB35085.1
OrganismKribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) [Complete proteome] [HAMAP] EMBL ADB35085.1
Taxonomic identifier479435 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesPropionibacterineaeNocardioidaceaeKribbella

Protein attributes

Sequence length606 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. SAAS SAAS001764

Ontologies

Keywords
   DomainSignal EMBL ADB35085.1
   Molecular functionGlycosidase SAAS SAAS001764
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3232 Potential EMBL ADB35085.1
Chain33 – 606574 Potential EMBL ADB35085.1
PRO_5000560296

Sequences

Sequence LengthMass (Da)Tools
D2PU34 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: F867091E4AD4BA4D

FASTA60664,028
        10         20         30         40         50         60 
MSALRRSVLT TLASATAVAT VAALVPAAAV AAPPPEPKGQ PPITSLQQVA TAMKGMSLEE 

        70         80         90        100        110        120 
KIGQMFVLFG YGPDAHKPDQ RNTNLYGVAT PAEVVAKYKP GGWIYFNARD NVQNPTQLAT 

       130        140        150        160        170        180 
YSNQLQTVAT STGIRVPMTI ATDQEQGVVV RIGPPATQFG GNMAHGAARS TADARTAAGI 

       190        200        210        220        230        240 
TGRELKAMGI RQDYAPVADV NVNALNPVIG VRSFSSDPQL VSDLTVAQVQ GYQKDAGIIA 

       250        260        270        280        290        300 
TAKHFPGHGD TVDDSHTSLP TINHTREQWN TIDAPPFKAA IKAGIDSIMT AHIVIPSLDP 

       310        320        330        340        350        360 
SGDPATLSKP IMTGVLRKEL GFKGLIITDA LEMAAVRAKY GDAEVAVRAI EAGVDQLLLP 

       370        380        390        400        410        420 
PAPDVQFRAV VDAVKSGRIS ERRIDESLMR ILLLKLKKGV LFHPFVDPAK VATTVGTPDH 

       430        440        450        460        470        480 
LATAQRIVDK SITLVKNNAN TLPLSNQARK VLVTGWGVNT TQALANSLTK RGATTTVAQT 

       490        500        510        520        530        540 
GAAPTDAAIA DAVAKAQAND VTVVLTQKAW DTRVTDKLAK QQKLVKDLLA TGKTVIVVAV 

       550        560        570        580        590        600 
RDPYDIAYFD QAPTYVATYG YQAVSMESLT KVLYGEIAPA GKLPVDIPVA GQPATALYPF 


GHGLSW 

« Hide

References

[1]"The complete genome of Kribbella flavida DSM 17836."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M. expand/collapse author list , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Pukall R., Klenk H.-P., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17836 / JCM 10339 / NBRC 14399.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001736 Genomic DNA. Translation: ADB35085.1.
RefSeqYP_003383884.1. NC_013729.1.

3D structure databases

ProteinModelPortalD2PU34.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB35085; ADB35085; Kfla_6082.
GeneID8722712.
KEGGkfl:Kfla_6082.
PATRIC32242680. VBIKriFla67707_6086.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000248527.
OMAKIMLDFR.

Enzyme and pathway databases

BioCycKFLA479435:GI0F-6135-MONOMER.

Family and domain databases

Gene3D3.20.20.300. 1 hit.
3.40.50.1700. 1 hit.
InterProIPR002772. Glyco_hydro_3_C.
IPR001764. Glyco_hydro_3_N.
IPR017853. Glycoside_hydrolase_SF.
IPR006311. TAT_signal.
[Graphical view]
PfamPF00933. Glyco_hydro_3. 1 hit.
PF01915. Glyco_hydro_3_C. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
SSF52279. SSF52279. 1 hit.
PROSITEPS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2PU34_KRIFD
AccessionPrimary (citable) accession number: D2PU34
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)