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D2PL39 (D2PL39_KRIFD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Laminin G sub domain 2 EMBL ADB34294.1
Gene names
Ordered Locus Names:Kfla_5280
OrganismKribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) [Complete proteome] [HAMAP]
Taxonomic identifier479435 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Propionibacterineae › Nocardioidaceae › Kribbella ›

Protein attributes

Sequence length604 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ADB34294.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2626 Potential EMBL ADB34294.1
Chain27 – 604578 Potential EMBL ADB34294.1
PRO_5000559857

Sequences

Sequence LengthMass (Da)Tools
D2PL39 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 57A23D427F69B459

FASTA60464,402
        10         20         30         40         50         60 
MPTPLRLMLA LVLVLPALTA TTAGARPMAE PAAVVQTVLF DKGGAGYGCY RIPAIVRTKA 

        70         80         90        100        110        120 
GTLLAFAEAR RTWCGDSQEI DLVMRRSTDN GRTWSAQKVV LSGTDTDPNA VATRGNPTPI 

       130        140        150        160        170        180 
VDYQTGRIVL LTTMDPGNGT DRPRTPYVQF SEDDGLTFSK ARSIGGQIDD PAWGWYATGP 

       190        200        210        220        230        240 
VHGIQLTRGA HQGRLVAGTN YDVSGKHAGQ LVYSDDSGET WHKGATDLRS DGLVPQEISV 

       250        260        270        280        290        300 
VEKVDGGIYA GARNNGGSAG NSRAFAVSND GGESYVAPYA PVVGLTTPTV QGSLVRLRAT 

       310        320        330        340        350        360 
DQGAKYNRIL FASPADPERR RYLTIRSSFD EGRTWQTVEQ GTRITSDWSG YSDMAVLGTG 

       370        380        390        400        410        420 
EIGLLYEGGT VDARDQIRFA RFTETDIGHP DGASGPTTPD VSGLGNHSYL RGGTTAVAGR 

       430        440        450        460        470        480 
FGQARDLDGT DDAIQLPYAE SLALGSGDFT AMAWIRYGAS TASQAIFWGY GINEFSQFWL 

       490        500        510        520        530        540 
RAEPASSRIR GLITVNGSTA AVASTRAYND NAWHHVALQR KAGTLSLWVD GAQVGSVAAP 

       550        560        570        580        590        600 
SGSISPGRPF RMYVGQRLDG LHRFDGSLDE VRIYKRALTA AEIASIRTSN VTTVPNVVLD 


LPLG

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References

[1]"The complete genome of Kribbella flavida DSM 17836."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M. expand/collapse author list , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Pukall R., Klenk H.-P., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17836 / JCM 10339 / NBRC 14399.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001736 Genomic DNA. Translation: ADB34294.1.
RefSeqYP_003383093.1. NC_013729.1.

3D structure databases

ProteinModelPortalD2PL39.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB34294; ADB34294; Kfla_5280.
GeneID8721901.
KEGGkfl:Kfla_5280.
PATRIC32241048. VBIKriFla67707_5279.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000253699.
KOK01186.
OMAYATGPVH.

Enzyme and pathway databases

BioCycKFLA479435:GI0F-5323-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR001791. Laminin_G.
IPR026948. Sialidase.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF5. PTHR10628:SF5. 1 hit.
SMARTSM00282. LamG. 1 hit.
[Graphical view]
SUPFAMSSF49899. ConA_like_lec_gl. 1 hit.
SSF50939. Sialidase. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD2PL39_KRIFD
AccessionPrimary (citable) accession number: D2PL39
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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