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Protein
Submitted name:

Glycoside hydrolase family 16

Gene

Kfla_5265

Organism
Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

HydrolaseImported

Enzyme and pathway databases

BioCyciKFLA479435:GI0F-5309-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glycoside hydrolase family 16Imported
Gene namesi
Ordered Locus Names:Kfla_5265Imported
OrganismiKribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399)Imported
Taxonomic identifieri479435 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaPropionibacterialesNocardioidaceaeKribbella
Proteomesi
  • UP000007967 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3232Sequence analysisAdd
BLAST
Chaini33 – 430398Sequence analysisPRO_5003034695Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi479435.Kfla_5265.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini27 – 303277GH16 (glycosyl hydrolase family 16)InterPro annotationAdd
BLAST
Domaini296 – 430135Ricin B-type lectinInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105FBU. Bacteria.
COG2273. LUCA.
HOGENOMiHOG000019479.
OMAiNPANYQC.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR000757. GH16.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF00722. Glyco_hydro_16. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
SMARTiSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF50370. SSF50370. 1 hit.
PROSITEiPS51762. GH16_2. 1 hit.
PS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D2PL24-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRFPRSRFRA AALLAAGSAV LGTALLQSPA TATTPTAETA SARAGAAASA
60 70 80 90 100
YAAAAVGPVV WSDEFNAAAG TPPDQSKWRY DIGGHGWGNN ERQYYTNSTR
110 120 130 140 150
NSAHDGNGNL VITARRESGG FQCHYGPCEY TSARLLTAST FTRTYGRFEA
160 170 180 190 200
RMKLPRTQGL WPAFWMLGTG NNGWPGNGEI DIMENIGKEP SNSYGTLHGP
210 220 230 240 250
GYSAGEAISS RYTLPNGQQF ADGFHTFTVD WEPNVVTWYV DGIQFARKTP
260 270 280 290 300
ADLGGDPWVF DHPFFMIMNV AVGGYWPGYP DASTVMPQTM TVDWVRVSSL
310 320 330 340 350
TSGGGSGGQI TGLAGKCLDV AGANSADGTT VQLYDCNGTN AQQWSRPGDG
360 370 380 390 400
TIRALGKCLD VAGAGTADGT RVQLATCNGN AAQQWVYSGA RDLVNPRANK
410 420 430
CLDVTGNNSA NATPTQIWTC TGGANQKWNV
Length:430
Mass (Da):45,603
Last modified:March 2, 2010 - v1
Checksum:i8E8E37CE8429ABCA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001736 Genomic DNA. Translation: ADB34279.1.
RefSeqiWP_012922833.1. NC_013729.1.

Genome annotation databases

EnsemblBacteriaiADB34279; ADB34279; Kfla_5265.
KEGGikfl:Kfla_5265.
PATRICi32241015. VBIKriFla67707_5263.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001736 Genomic DNA. Translation: ADB34279.1.
RefSeqiWP_012922833.1. NC_013729.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi479435.Kfla_5265.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADB34279; ADB34279; Kfla_5265.
KEGGikfl:Kfla_5265.
PATRICi32241015. VBIKriFla67707_5263.

Phylogenomic databases

eggNOGiENOG4105FBU. Bacteria.
COG2273. LUCA.
HOGENOMiHOG000019479.
OMAiNPANYQC.

Enzyme and pathway databases

BioCyciKFLA479435:GI0F-5309-MONOMER.

Family and domain databases

Gene3Di2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR000757. GH16.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamiPF00722. Glyco_hydro_16. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
[Graphical view]
SMARTiSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF50370. SSF50370. 1 hit.
PROSITEiPS51762. GH16_2. 1 hit.
PS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17836 / JCM 10339 / NBRC 14399Imported.

Entry informationi

Entry nameiD2PL24_KRIFD
AccessioniPrimary (citable) accession number: D2PL24
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: April 13, 2016
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.