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D2PKN1 (D2PKN1_KRIFD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595
Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595
Gene names
Name:ppc HAMAP-Rule MF_00595
Ordered Locus Names:Kfla_1442
OrganismKribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) [Complete proteome] [HAMAP]
Taxonomic identifier479435 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Propionibacterineae › Nocardioidaceae › Kribbella ›

Protein attributes

Sequence length879 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. SAAS SAAS018129 HAMAP-Rule MF_00595

Cofactor

Magnesium By similarity. SAAS SAAS018129 HAMAP-Rule MF_00595

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1511 By similarity HAMAP-Rule MF_00595
Active site5441 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
D2PKN1 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 22053730EE5A103F

FASTA87996,507
        10         20         30         40         50         60 
MTETGSQASA RTRTRARFEV PEELRADVRL LGEILGRVLV EYAGQPLLDD VEKLRELTIA 

        70         80         90        100        110        120 
GDGEAAEQLV ASWPHERAED VARAFTCYFH LTNLSEELHR ARVLRERDRS GDAPAVSELA 

       130        140        150        160        170        180 
QAVERISADA GEQQARALLN GLEFRPVLTA HPTEARRRAV LATIRRISSL LEERNDPRAG 

       190        200        210        220        230        240 
DSELAENRRR LVEQVDILWR TSQLRTSRPT PLDEVRSAMA VFEETLFDVV GNVYRRLDDA 

       250        260        270        280        290        300 
LAGDAAGTRP PVVAPFVRLG SWIGGDRDGN PNVTAAITRE AMQIQADHVL RALEQATDEL 

       310        320        330        340        350        360 
GRALTLDAAT TPPSAPVRRI LEDARAANPA LIADIETRSP SEPHRQLLLL AARRLAATRS 

       370        380        390        400        410        420 
RDADFGYPRA ADFLHELKVL QDSLVSAGAP RQAYGQLQQL IWQVSSFGFH LAELEVRQHS 

       430        440        450        460        470        480 
SVHAKALEEV LGGGELSDQT EEVLATLRVI GQIQQRFGPE ACRRYVVSFT RSAADLAAVY 

       490        500        510        520        530        540 
ELADAAMDGR PIELDVVPLF ETGEDLQNSV EVLDNAIQLT RVRHRLTAND RRFEVMLGYS 

       550        560        570        580        590        600 
DSAKDVGPVS ATLALYDAQA RITAWAQRNA IRLTLFHGRG GALGRGGGPA NRAVLAQAPG 

       610        620        630        640        650        660 
SVGGRFKLTE QGEAIPARYG NAPIAQRHIE QVTAATLLAS TPAVEDRAAA AANRFAVVEK 

       670        680        690        700        710        720 
TLDEAARTAY HRLVKADGFA EWFGRVTPLE ELGQLPLGSR PARRGVAVSS LEDLRAIPWV 

       730        740        750        760        770        780 
FAWSQARVNA PGWYGLGSAL AAVGDVAVLQ DANKNWPLFQ VMLENAEMSL AKTDRRILGR 

       790        800        810        820        830        840 
YLELGDRPDL SQLMLDEHAL TTEWVLKVLD GDRLLAGRRV LGRAVELRNP YVDALSYLQL 

       850        860        870 
RALRDLRTDD SLDEQQIVRT RRLLLLTVSG VAAGLQNTG

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References

[1]"The complete genome of Kribbella flavida DSM 17836."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Saunders E., Brettin T., Detter J.C., Han C., Larimer F., Land M. expand/collapse author list , Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Pukall R., Klenk H.-P., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17836 / JCM 10339 / NBRC 14399.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001736 Genomic DNA. Translation: ADB30543.1.
RefSeqYP_003379342.1. NC_013729.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB30543; ADB30543; Kfla_1442.
GeneID8718035.
KEGGkfl:Kfla_1442.
PATRIC32233309. VBIKriFla67707_1437.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000238647.
KOK01595.
OMAAIPWVFG.

Enzyme and pathway databases

BioCycKFLA479435:GI0F-1457-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase.
[Graphical view]
PfamPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. Pyrv/PenolPyrv_Kinase_cat. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2PKN1_KRIFD
AccessionPrimary (citable) accession number: D2PKN1
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info