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D2P9M5

- D2P9M5_LISM2

UniProt

D2P9M5 - D2P9M5_LISM2

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Protein

Glutamate decarboxylase

Gene

LM5923_2578

Organism
Listeria monocytogenes serotype 1/2a (strain 08-5923)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

Pyridoxal phosphate.UniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciLMON637381:GH7Z-2639-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:LM5923_2578Imported
OrganismiListeria monocytogenes serotype 1/2a (strain 08-5923)Imported
Taxonomic identifieri637381 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
ProteomesiUP000006922: Chromosome

Structurei

3D structure databases

ProteinModelPortaliD2P9M5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.
OMAiNAPKEMS.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

D2P9M5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLYSEDDKRK QESYRIPLFG SEEESTSIPK YVLKKEPMEP RIAYQLVKDQ
60 70 80 90 100
LMDEGNARQN LATFCQTYME KEAEILMAET LEKNAIDKSE YPQTAELENR
110 120 130 140 150
CVNILADLWN APKDMSYLGT STVGSSEACM LGGLAMKFRW RNNAEKRGLD
160 170 180 190 200
IQAKRPNLII SSGYQVCWEK FCVYWDVDMR VVPMDKDHLS LDVDKVFDLV
210 220 230 240 250
DEYTIGIVGI LGITYTGKFD DIQLLDEKVE AYNETNEHQL VIHIDGASGA
260 270 280 290 300
MFTPFVNPEL PWDFRLKNVV SINTSGHKYG LVYPGVGWIL WKDKEYLPKE
310 320 330 340 350
LIFEVSYLGG SMPTMAINFS RSASQIIGQY YNFLRYGFEG YREIHEKTKK
360 370 380 390 400
TALYLAKTVE KSGYFEIIND GANLPIVCYK MKEGLDVEWT LYDLADQLLM
410 420 430 440 450
KGWQVPAYPL PADLSDTIIQ RFVCRADLGY NVAEEFAADF ADAIHNLEHA
460
RVLYHDKERN DSYGFTH
Length:467
Mass (Da):53,655
Last modified:March 2, 2010 - v1
Checksum:i3DEF1036B7BD94F4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001604 Genomic DNA. Translation: ADB72419.1.
RefSeqiYP_003417781.1. NC_013768.1.

Genome annotation databases

EnsemblBacteriaiADB72419; ADB72419; LM5923_2578.
GeneIDi8759372.
KEGGilmy:LM5923_2578.
PATRICi32259056. VBILisMon5116_2604.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001604 Genomic DNA. Translation: ADB72419.1 .
RefSeqi YP_003417781.1. NC_013768.1.

3D structure databases

ProteinModelPortali D2P9M5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADB72419 ; ADB72419 ; LM5923_2578 .
GeneIDi 8759372.
KEGGi lmy:LM5923_2578.
PATRICi 32259056. VBILisMon5116_2604.

Phylogenomic databases

HOGENOMi HOG000070228.
KOi K01580.
OMAi NAPKEMS.

Enzyme and pathway databases

BioCyci LMON637381:GH7Z-2639-MONOMER.

Family and domain databases

Gene3Di 3.40.640.10. 1 hit.
InterProi IPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view ]
PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfami PF00282. Pyridoxal_deC. 1 hit.
[Graphical view ]
SUPFAMi SSF53383. SSF53383. 1 hit.
TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak."
    Gilmour M.W., Graham M., Van Domselaar G., Tyler S., Kent H., Trout-Yakel K.M., Larios O., Allen V., Lee B., Nadon C.
    BMC Genomics 11:120-120(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 08-5923Imported.

Entry informationi

Entry nameiD2P9M5_LISM2
AccessioniPrimary (citable) accession number: D2P9M5
Entry historyi
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 29, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3