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D2P9B8 (D2P9B8_LISM2) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:LM5923_0479 EMBL ADB70325.1
OrganismListeria monocytogenes serotype 1/2a (strain 08-5923) [Complete proteome] [HAMAP] EMBL ADB70325.1
Taxonomic identifier637381 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length462 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
D2P9B8 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: D31D66FBCE101B6D

FASTA46252,525
        10         20         30         40         50         60 
MFKTNVEQNN VPVFGSFESG QDLPEKRMNK ESVDPRIAYQ LVKDQLIDEG SARQNLATFC 

        70         80         90        100        110        120 
QTYMEPEAEQ IMAETMEKNA IDKSEYPQTA KLESSCVNML ADLWNVDESE HYMGTSTVGS 

       130        140        150        160        170        180 
SEACMLGGMA MKFRWRSAAL KNGLDIHAKK PNLVISSGYQ VCWEKFCVYW DIELREVPMS 

       190        200        210        220        230        240 
EEHLSINTDI IMDYVDEYTI GIVGILGITY TGKFDDIMTL NDLVEDYNNT HDNEVVIHVD 

       250        260        270        280        290        300 
GASGAMFTPF VEPGLEWDFR LPNVVSINTS GHKYGLVYPG VGWILWRDKE YLPEELVFDV 

       310        320        330        340        350        360 
SYLGGHMPTM AINFSRSASQ IIGQYYNFLR FGYEGYRQIH MRTRDGALQL SQAVAETGLF 

       370        380        390        400        410        420 
EIYNDGANLP IVCYKLKDDA NVAWTLYDLA DRLQMKGWQV PAYPLPKEMG NTIIQRYVCR 

       430        440        450        460 
GDLGQNMVTA FKNDLSESIE ELNNAHILYH DVNTSKTHGF TH 

« Hide

References

[1]"High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak."
Gilmour M.W., Graham M., Van Domselaar G., Tyler S., Kent H., Trout-Yakel K.M., Larios O., Allen V., Lee B., Nadon C.
BMC Genomics 11:120-120(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 08-5923 EMBL ADB70325.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001604 Genomic DNA. Translation: ADB70325.1.
RefSeqYP_003415687.1. NC_013768.1.

3D structure databases

ProteinModelPortalD2P9B8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB70325; ADB70325; LM5923_0479.
GeneID8757278.
KEGGlmy:LM5923_0479.
PATRIC32254696. VBILisMon5116_0484.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMAAQYYTFL.

Enzyme and pathway databases

BioCycLMON637381:GH7Z-485-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD2P9B8_LISM2
AccessionPrimary (citable) accession number: D2P9B8
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: May 14, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)