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D2P8M8 (D2P8M8_LISM2) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:LM5923_0356 EMBL ADB70202.1
OrganismListeria monocytogenes serotype 1/2a (strain 08-5923) [Complete proteome] [HAMAP] EMBL ADB70202.1
Taxonomic identifier637381 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length471 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
   Molecular functionGlycosidase RuleBase RU004468
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D2P8M8 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 1D961041BDC450EC

FASTA47153,669
        10         20         30         40         50         60 
MHTNTGFPAD FLWGGAAAAN QFEGAYNVDG KGLSVQDVTP KGGFGHITDG PTPDNLKLEG 

        70         80         90        100        110        120 
IDFYHRYKDD VKLFAEMGFK VFRTSIAWSR IFPNGDETEP NEAGLQFYDD LFDELLAHNI 

       130        140        150        160        170        180 
EPLITLSHYE TPLHLSKTYD GWVNRKMIDF YENYVRTVFN RYKGKVKYWL TFNEINSILH 

       190        200        210        220        230        240 
APFMSGGIST SPDKLSQKDL YQAVHHELVA SALATKIGHE IMPEAQIGCM VLAMPTYPLT 

       250        260        270        280        290        300 
SHPDDIIAVM EAERKNYFFS DVHVRGTYPG YMKRYFRENN IELDVTEEDL EILKNTVDFI 

       310        320        330        340        350        360 
SFSYYMSTTE TADESKRKAG AGNILGGVQN PYLEASEWGW QIDPQGLRVV LNEFWDRYQK 

       370        380        390        400        410        420 
PLFIVENGLG AIDQLEKDEN GNYTVNDDYR INYLSAHLSQ VKEAIKDGVD LMGYTSWGCI 

       430        440        450        460        470 
DLVSASTAEM KKRYGFIYVD RNNDGTGTLN RYKKKSFDWY KNVIATNGED L 

« Hide

References

[1]"High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak."
Gilmour M.W., Graham M., Van Domselaar G., Tyler S., Kent H., Trout-Yakel K.M., Larios O., Allen V., Lee B., Nadon C.
BMC Genomics 11:120-120(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 08-5923 EMBL ADB70202.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001604 Genomic DNA. Translation: ADB70202.1.
RefSeqYP_003415564.1. NC_013768.1.

3D structure databases

ProteinModelPortalD2P8M8.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB70202; ADB70202; LM5923_0356.
GeneID8757155.
KEGGlmy:LM5923_0356.
PATRIC32254450. VBILisMon5116_0361.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000088631.
KOK01223.
OMAYRIRYLN.

Enzyme and pathway databases

BioCycLMON637381:GH7Z-362-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2P8M8_LISM2
AccessionPrimary (citable) accession number: D2P8M8
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)