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D2P0U3 (D2P0U3_LISM1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:LM5578_1104 EMBL ADB67857.1
OrganismListeria monocytogenes serotype 1/2a (strain 08-5578) [Complete proteome] [HAMAP] EMBL ADB67857.1
Taxonomic identifier653938 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length212 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Contains HTH luxR-type DNA-binding domain. SAAS SAAS016032

Contains response regulatory domain. SAAS SAAS016032

Sequences

Sequence LengthMass (Da)Tools
D2P0U3 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: 5113DB39BDA137E5

FASTA21223,614
        10         20         30         40         50         60 
MIKVLLVDDH EMVRIGVSAY LSVQDDMEVV GEAENGREGA DMALELRPDI ILMDLVMDEM 

        70         80         90        100        110        120 
DGIEATKEIM QNWKEAKIII VTSFIDDEKV YPALEAGASS YMLKTSTASE IADAIRATYG 

       130        140        150        160        170        180 
GDSVLEPEVT GKMMQRLTAK PEKNLHDDLT NRENEILLLI AEGKSNQEIA DELFITLKTV 

       190        200        210 
KTHVSNILSK LGVQDRTQAA IYAFKHDLVE KK 

« Hide

References

[1]"High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak."
Gilmour M.W., Graham M., Van Domselaar G., Tyler S., Kent H., Trout-Yakel K.M., Larios O., Allen V., Lee B., Nadon C.
BMC Genomics 11:120-120(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 08-5578 EMBL ADB67857.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001602 Genomic DNA. Translation: ADB67857.1.
RefSeqYP_003413219.1. NC_013766.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB67857; ADB67857; LM5578_1104.
GeneID8748093.
KEGGlmn:LM5578_1104.
PATRIC35276655. VBILisMon159512_1113.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000034813.
KOK11618.

Enzyme and pathway databases

BioCycLMON653938:GJ8G-1111-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR011006. CheY-like_superfamily.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00196. GerE. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
SMARTSM00421. HTH_LUXR. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF46894. SSF46894. 1 hit.
SSF52172. SSF52172. 1 hit.
PROSITEPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2P0U3_LISM1
AccessionPrimary (citable) accession number: D2P0U3
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: April 16, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)