D2P0U3 (D2P0U3_LISM1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein EMBL ADB67857.1

Gene names

Ordered Locus Names:

LM5578_1104 EMBL ADB67857.1

Organism

Listeria monocytogenes serotype 1/2a (strain 08-5578) [Complete proteome] [HAMAP] EMBL ADB67857.1

Taxonomic identifier

653938 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Listeriaceae › Listeria › Listeria monocytogenes

Protein attributes

Sequence length	212 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707 SAAS SAAS016032 Contains 1 response regulatory domain. SAAS SAAS016032

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000707 SAAS SAAS016032
Ligand	DNA-binding RuleBase RU000707 SAAS SAAS016032
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	intracellular signal transduction Inferred from electronic annotation. Source: GOC transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2P0U3 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: 5113DB39BDA137E5	FASTA	212	23,614
	10 20 30 40 50 60 MIKVLLVDDH EMVRIGVSAY LSVQDDMEVV GEAENGREGA DMALELRPDI ILMDLVMDEM 70 80 90 100 110 120 DGIEATKEIM QNWKEAKIII VTSFIDDEKV YPALEAGASS YMLKTSTASE IADAIRATYG 130 140 150 160 170 180 GDSVLEPEVT GKMMQRLTAK PEKNLHDDLT NRENEILLLI AEGKSNQEIA DELFITLKTV 190 200 210 KTHVSNILSK LGVQDRTQAA IYAFKHDLVE KK

References

[1]

"High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak." Gilmour M.W., Graham M., Van Domselaar G., Tyler S., Kent H., Trout-Yakel K.M., Larios O., Allen V., Lee B., Nadon C. BMC Genomics 11:120-120(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 08-5578 EMBL ADB67857.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001602 Genomic DNA. Translation: ADB67857.1.
RefSeq	YP_003413219.1. NC_013766.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB67857; ADB67857; LM5578_1104.
GeneID	8748093.
KEGG	lmn:LM5578_1104.
PATRIC	35276655. VBILisMon159512_1113.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000034813.
KO	K11618.
Enzyme and pathway databases
BioCyc	LMON653938:GJ8G-1111-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR011006. CheY-like_superfamily. IPR016032. Sig_transdc_resp-reg_C-effctor. IPR001789. Sig_transdc_resp-reg_receiver. IPR000792. Tscrpt_reg_LuxR_C. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00196. GerE. 1 hit. PF00072. Response_reg. 1 hit. [Graphical view]
PRINTS	PR00038. HTHLUXR.
SMART	SM00421. HTH_LUXR. 1 hit. SM00448. REC. 1 hit. [Graphical view]
SUPFAM	SSF46894. Bipartite_resp_reg_C-effector. 1 hit. SSF52172. CheY_like. 1 hit.
PROSITE	PS00622. HTH_LUXR_1. 1 hit. PS50043. HTH_LUXR_2. 1 hit. PS50110. RESPONSE_REGULATORY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2P0U3_LISM1

Accession

Primary (citable) accession number: D2P0U3

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)