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D2NYA1

- D2NYA1_LISM1

UniProt

D2NYA1 - D2NYA1_LISM1

Protein

Glutamate decarboxylase

Gene

LM5578_2629

Organism
Listeria monocytogenes serotype 1/2a (strain 08-5578)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (02 Mar 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciLMON653938:GJ8G-2683-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:LM5578_2629Imported
    OrganismiListeria monocytogenes serotype 1/2a (strain 08-5578)Imported
    Taxonomic identifieri653938 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria
    ProteomesiUP000001900: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD2NYA1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000070228.
    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D2NYA1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLYSEDDKRK QESYRIPLFG SEEESTSIPK YVLKKEPMEP RIAYQLVKDQ    50
    LMDEGNARQN LATFCQTYME KEAEILMAET LEKNAIDKSE YPQTAELENR 100
    CVNILADLWN APKDMSYLGT STVGSSEACM LGGLAMKFRW RNNAEKRGLD 150
    IQAKRPNLII SSGYQVCWEK FCVYWDVDMR VVPMDKDHLS LDVDKVFDLV 200
    DEYTIGIVGI LGITYTGKFD DIQLLDEKVE AYNETNEHQL VIHIDGASGA 250
    MFTPFVNPEL PWDFRLKNVV SINTSGHKYG LVYPGVGWIL WKDKEYLPKE 300
    LIFEVSYLGG SMPTMAINFS RSASQIIGQY YNFLRYGFEG YREIHEKTKK 350
    TALYLAKTVE KSGYFEIIND GANLPIVCYK MKEGLDVEWT LYDLADQLLM 400
    KGWQVPAYPL PADLSDTIIQ RFVCRADLGY NVAEEFAADF ADAIHNLEHA 450
    RVLYHDKERN DSYGFTH 467
    Length:467
    Mass (Da):53,655
    Last modified:March 2, 2010 - v1
    Checksum:i3DEF1036B7BD94F4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001602 Genomic DNA. Translation: ADB69375.1.
    RefSeqiYP_003414737.1. NC_013766.1.

    Genome annotation databases

    EnsemblBacteriaiADB69375; ADB69375; LM5578_2629.
    GeneIDi8749611.
    KEGGilmn:LM5578_2629.
    PATRICi35279844. VBILisMon159512_2653.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001602 Genomic DNA. Translation: ADB69375.1 .
    RefSeqi YP_003414737.1. NC_013766.1.

    3D structure databases

    ProteinModelPortali D2NYA1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADB69375 ; ADB69375 ; LM5578_2629 .
    GeneIDi 8749611.
    KEGGi lmn:LM5578_2629.
    PATRICi 35279844. VBILisMon159512_2653.

    Phylogenomic databases

    HOGENOMi HOG000070228.
    KOi K01580.

    Enzyme and pathway databases

    BioCyci LMON653938:GJ8G-2683-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak."
      Gilmour M.W., Graham M., Van Domselaar G., Tyler S., Kent H., Trout-Yakel K.M., Larios O., Allen V., Lee B., Nadon C.
      BMC Genomics 11:120-120(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 08-5578Imported.

    Entry informationi

    Entry nameiD2NYA1_LISM1
    AccessioniPrimary (citable) accession number: D2NYA1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: March 2, 2010
    Last sequence update: March 2, 2010
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3