Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

D2NY70 (D2NY70_LISM1) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:LM5578_0602 EMBL ADB67357.1
OrganismListeria monocytogenes serotype 1/2a (strain 08-5578) [Complete proteome] [HAMAP] EMBL ADB67357.1
Taxonomic identifier653938 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesListeriaceaeListeria

Protein attributes

Sequence length464 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D2NY70 [UniParc].

Last modified March 2, 2010. Version 1.
Checksum: AD710D13E2E531AB

FASTA46454,102
        10         20         30         40         50         60 
MTYKFPENFW WGSAASGPQT EGAADVDGRK PSIWDHWYKI EPGRFFNDVG PTNTSNFYYQ 

        70         80         90        100        110        120 
YKEDIALMKQ TGHNSFRTSI QWSRLIPDGI GEVNPKAVDF YNRVIDEMLA NDVEPFMNLY 

       130        140        150        160        170        180 
HFDMPMSMQE KGGFESREVV DAYATFAKTC FELFGDRVKH WFTFNEPIVP VEAGYLYDMH 

       190        200        210        220        230        240 
YPNVVDFKRA TQVAYHTTLA HALAVKEFHA LEIPEGQIGI ILNLTPSYPR SQNPADLKAA 

       250        260        270        280        290        300 
HIADLIFNRS FLDPVTKGEF PTDLVEIIRE HDALPEYTEE DLAIIKNNII DILGVNYYQP 

       310        320        330        340        350        360 
RRVKAKEYAA HPDAPFMPEH LFDNYEMPYR KMNPYRGWEI FERAIYDIAI NLRDNYDNIP 

       370        380        390        400        410        420 
FFISENGMGV EGESRYRNAD GMIEDTYRID FIKSHLKWLH KAIEEGANCH GYHLWTFMDC 

       430        440        450        460 
WSWANAYKNR YGLVEVDLDN DFKRTVKASG HWYKELAENN GFED 

« Hide

References

[1]"High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak."
Gilmour M.W., Graham M., Van Domselaar G., Tyler S., Kent H., Trout-Yakel K.M., Larios O., Allen V., Lee B., Nadon C.
BMC Genomics 11:120-120(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 08-5578 EMBL ADB67357.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001602 Genomic DNA. Translation: ADB67357.1.
RefSeqYP_003412719.1. NC_013766.1.

3D structure databases

ProteinModelPortalD2NY70.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADB67357; ADB67357; LM5578_0602.
GeneID8747593.
KEGGlmn:LM5578_0602.
PATRIC35275649. VBILisMon159512_0615.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000088632.
KOK01223.

Enzyme and pathway databases

BioCycLMON653938:GJ8G-605-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2NY70_LISM1
AccessionPrimary (citable) accession number: D2NY70
Entry history
Integrated into UniProtKB/TrEMBL: March 2, 2010
Last sequence update: March 2, 2010
Last modified: October 16, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)