D2NXU9 (D2NXU9_LISM1) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein EMBL ADB67236.1

Gene names

Ordered Locus Names:

LM5578_0480 EMBL ADB67236.1

Organism

Listeria monocytogenes serotype 1/2a (strain 08-5578) [Complete proteome] [HAMAP] EMBL ADB67236.1

Taxonomic identifier

653938 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Bacillales › Listeriaceae › Listeria › Listeria monocytogenes

Protein attributes

Sequence length	462 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2NXU9 [UniParc]. Last modified March 2, 2010. Version 1. Checksum: D31D66FBCE101B6D	FASTA	462	52,525
	10 20 30 40 50 60 MFKTNVEQNN VPVFGSFESG QDLPEKRMNK ESVDPRIAYQ LVKDQLIDEG SARQNLATFC 70 80 90 100 110 120 QTYMEPEAEQ IMAETMEKNA IDKSEYPQTA KLESSCVNML ADLWNVDESE HYMGTSTVGS 130 140 150 160 170 180 SEACMLGGMA MKFRWRSAAL KNGLDIHAKK PNLVISSGYQ VCWEKFCVYW DIELREVPMS 190 200 210 220 230 240 EEHLSINTDI IMDYVDEYTI GIVGILGITY TGKFDDIMTL NDLVEDYNNT HDNEVVIHVD 250 260 270 280 290 300 GASGAMFTPF VEPGLEWDFR LPNVVSINTS GHKYGLVYPG VGWILWRDKE YLPEELVFDV 310 320 330 340 350 360 SYLGGHMPTM AINFSRSASQ IIGQYYNFLR FGYEGYRQIH MRTRDGALQL SQAVAETGLF 370 380 390 400 410 420 EIYNDGANLP IVCYKLKDDA NVAWTLYDLA DRLQMKGWQV PAYPLPKEMG NTIIQRYVCR 430 440 450 460 GDLGQNMVTA FKNDLSESIE ELNNAHILYH DVNTSKTHGF TH

References

[1]

"High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak." Gilmour M.W., Graham M., Van Domselaar G., Tyler S., Kent H., Trout-Yakel K.M., Larios O., Allen V., Lee B., Nadon C. BMC Genomics 11:120-120(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 08-5578 EMBL ADB67236.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001602 Genomic DNA. Translation: ADB67236.1.
RefSeq	YP_003412598.1. NC_013766.1.
3D structure databases
ProteinModelPortal	D2NXU9.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADB67236; ADB67236; LM5578_0480.
GeneID	8747472.
KEGG	lmn:LM5578_0480.
PATRIC	35275388. VBILisMon159512_0485.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000070228.
KO	K01580.
Enzyme and pathway databases
BioCyc	LMON653938:GJ8G-484-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D2NXU9_LISM1

Accession

Primary (citable) accession number: D2NXU9

Entry history

Integrated into UniProtKB/TrEMBL:	March 2, 2010
Last sequence update:	March 2, 2010
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)