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D2KFJ6 (D2KFJ6_9FIRM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismCellulosilyticum ruminicola EMBL ACZ98598.1
Taxonomic identifier425254 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesLachnospiraceaeCellulosilyticum

Protein attributes

Sequence length566 AA.
Sequence statusFragment.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue5661 EMBL ACZ98598.1

Sequences

Sequence LengthMass (Da)Tools
D2KFJ6 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: 64E5875C10D6F971

FASTA56661,445
        10         20         30         40         50         60 
MVKSMRKSIF SVIATCLFAI LFCLTLSQET FAAITPVIPP AGYDSVKNVP HGTIKEISYY 

        70         80         90        100        110        120 
SAATKSTRKA KIYLPAGYSN NEKYSVLYLL HGIGGNESEW PNNGKPNVIA DNLIAEGKVK 

       130        140        150        160        170        180 
PCIIVFPNGN ATGAGINDGW ENFTKDLIGS LIPYVEKNYS VYTDREHRAL SGLSMGGGQT 

       190        200        210        220        230        240 
YNIGFTNLNT FAYIGGYSAA PNTKSTNVLF PDNGAKAKSD LKLLFISCGS TDSLKQFGDS 

       250        260        270        280        290        300 
VHNFCQSRQI NHTYWILSGR GHDWSVWSPS LWNNLQMLEE AGFTKGTTGT TTPSQEEKPV 

       310        320        330        340        350        360 
VNDKYATLQD GWYYIKGVGS NKYLQVANNK GGDGVNVEIG TGTGVAGQKW YLTNIQDGYV 

       370        380        390        400        410        420 
TLKNGQGYTL DVVYGKDEDN TNIQTYTANG MSAQEFKILP TSKENVYGIV TRCSTDAKGL 

       430        440        450        460        470        480 
DVENKGTTDG SNVMQYAYYG AANQTWIFEA CNASSESTKP EETKPEQTNK DAISAKVTSD 

       490        500        510        520        530        540 
WGSGAVADFT VINTTGKDLN NWICTFTTNR KITSVWNATI VAEEGNTYTI TGPSWQANLG 

       550        560 
AGQSYTFGCQ LESGSGEIII ANVVLK 

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References

[1]"Cellulosilyticum ruminicola, a newly described rumen bacterium that possesses redundant fibrolytic-protein-encoding genes and degrades lignocellulose with multiple carbohydrate- borne fibrolytic enzymes."
Cai S., Li J., Hu F.Z., Zhang K., Luo Y., Janto B., Boissy R., Ehrlich G., Dong X.
Appl. Environ. Microbiol. 76:3818-3824(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CGMCC 1.5065 EMBL ACZ98598.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GU211274 Genomic DNA. Translation: ACZ98598.1.

3D structure databases

ProteinModelPortalD2KFJ6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D2.60.40.290. 1 hit.
InterProIPR008965. Carb-bd_dom.
IPR012291. CBD_carb-bd_dom.
IPR001919. Cellulose-bd_dom_fam2_bac.
IPR000801. Esterase_put.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamPF00553. CBM_2. 1 hit.
PF00756. Esterase. 1 hit.
PF14200. RicinB_lectin_2. 1 hit.
[Graphical view]
SMARTSM00637. CBD_II. 1 hit.
SM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMSSF49384. SSF49384. 1 hit.
SSF50370. SSF50370. 1 hit.
PROSITEPS51173. CBM2. 1 hit.
PS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2KFJ6_9FIRM
AccessionPrimary (citable) accession number: D2KFJ6
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: October 16, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)