D2HXW9 (D2HXW9_AILME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSAMEP00000002891

Gene names

Name:	CRY1 Ensembl ENSAMEP00000002891
ORF Names:	PANDA_017512 EMBL EFB22605.1

Organism

Ailuropoda melanoleuca (Giant panda) [Reference proteome]

Taxonomic identifier

9646 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Carnivora › Caniformia › Ursidae › Ailuropoda

Protein attributes

Sequence length	587 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	DNA repair Inferred from electronic annotation. Source: InterPro circadian rhythm Inferred from electronic annotation. Source: Compara negative regulation of transcription from RNA polymerase II promoter Inferred from electronic annotation. Source: Compara regulation of circadian rhythm Inferred from electronic annotation. Source: Compara
Cellular_component	mitochondrion Inferred from electronic annotation. Source: Compara nucleus Inferred from electronic annotation. Source: Compara
Molecular_function	DNA photolyase activity Inferred from electronic annotation. Source: InterPro double-stranded DNA binding Inferred from electronic annotation. Source: Compara protein binding transcription factor activity Inferred from electronic annotation. Source: Compara
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	587	1	EMBL EFB22605.1

Sequences

	Sequence		Length	Mass (Da)
	D2HXW9 [UniParc]. Last modified February 9, 2010. Version 1. Checksum: 5DA38266D7896EEA	FASTA	587	66,455
	10 20 30 40 50 60 MGVNAVHWFR KGLRLHDNPA LKECIQGADT IRCVYILDPW FAGSSNVGIN RWRFLLQCLE 70 80 90 100 110 120 DLDANLRKLN SRLFVIRGQP ADVFPRLFKE WNITKLSIEY DSEPFGKERD AAIKKLATEA 130 140 150 160 170 180 GVEVIVRISH TLYDLDKIIE LNGGQPPLTY KRFQTLISKM EPLEIPVETI TSEVIEKCTT 190 200 210 220 230 240 PLSDDHDEKY GVPSLEELGF DTDGLPSAVW PGGETEALTR LERHLERKAW VANFERPRMN 250 260 270 280 290 300 ANSLLASPTG LSPYLRFGCL SCRLFYFKLT DLYKKVKKNS SPPLSLYGQL LWREFFYTAA 310 320 330 340 350 360 TNNPRFDKME GNPICVQIPW DKNPEALAKW AEGRTGFPWI DAIMTQLRQE GWIHHLARHA 370 380 390 400 410 420 VACFLTRGDL WISWEEGMKV FEELLLDADW SINAGSWMWL SCSSFFQQFF HCYCPVGFGR 430 440 450 460 470 480 RTDPNGDYIR RYLPVLRGFP AKYIYDPWNA PEGIQKVAKC LIGVNYPKPM VNHAEASRLN 490 500 510 520 530 540 IERMKQIYQQ LSRYRGLGLL ASVPANPNGN GGLMGYSPGE NIPGCSSSGS CSQGSGILHY 550 560 570 580 AHGDSQQTHL LKQGRSSMGS GLSSGKRPSE EEDTQSIGPK VQRQSTN

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The sequence and de novo assembly of the giant panda genome." Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J. , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J. Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (SEP-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	ACTA01004465 Genomic DNA. No translation available. ACTA01012465 Genomic DNA. No translation available. ACTA01020465 Genomic DNA. No translation available. ACTA01028465 Genomic DNA. No translation available. ACTA01036465 Genomic DNA. No translation available. ACTA01044464 Genomic DNA. No translation available. ACTA01052464 Genomic DNA. No translation available. ACTA01060464 Genomic DNA. No translation available. ACTA01068464 Genomic DNA. No translation available. ACTA01076464 Genomic DNA. No translation available. ACTA01084464 Genomic DNA. No translation available. ACTA01092464 Genomic DNA. No translation available. ACTA01172458 Genomic DNA. No translation available. ACTA01180456 Genomic DNA. No translation available. ACTA01188454 Genomic DNA. No translation available. ACTA01196452 Genomic DNA. No translation available. GL193654 Genomic DNA. Translation: EFB22605.1.
RefSeq	XP_002927704.1. XM_002927658.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSAMET00000003013; ENSAMEP00000002891; ENSAMEG00000002720.
GeneID	100484388.
KEGG	aml:100484388.
Organism-specific databases
CTD	1407.
Phylogenomic databases
GeneTree	ENSGT00500000044813.
HOGENOM	HOG000245622.
KO	K02295.
OMA	FDTDGLP.
Family and domain databases
Gene3D	3.40.50.620. 1 hit.
InterPro	IPR006050. DNA_photolyase_N. IPR005101. Photolyase_FAD-bd/Cryptochr_C. IPR014729. Rossmann-like_a/b/a_fold. [Graphical view]
Pfam	PF00875. DNA_photolyase. 1 hit. PF03441. FAD_binding_7. 1 hit. [Graphical view]
SUPFAM	SSF52425. DNA_photolyase_N. 1 hit. SSF48173. Photolyase_FAD-bd/Cryptochr_C. 1 hit.
PROSITE	PS51645. PHR_CRY_ALPHA_BETA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2HXW9_AILME

Accession

Primary (citable) accession number: D2HXW9

Entry history

Integrated into UniProtKB/TrEMBL:	February 9, 2010
Last sequence update:	February 9, 2010
Last modified:	May 1, 2013
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)