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Protein
Submitted name:

Cryptochrome circadian clock 1

Gene

CRY1

Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Cryptochrome circadian clock 1Imported
Gene namesi
Name:CRY1Imported
ORF Names:PANDA_017512Imported
OrganismiAiluropoda melanoleuca (Giant panda)Imported
Taxonomic identifieri9646 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda
Proteomesi
  • UP000008912 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9646.ENSAMEP00000002891.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 132Photolyase/cryptochrome alpha/betaInterPro annotationAdd BLAST130

Phylogenomic databases

eggNOGiKOG0133. Eukaryota.
COG0415. LUCA.
GeneTreeiENSGT00500000044813.
HOGENOMiHOG000245622.
KOiK02295.
OMAiCRMIVAS.
OrthoDBiEOG091G07M3.
TreeFamiTF323191.

Family and domain databases

Gene3Di3.40.50.620. 1 hit.
InterProiView protein in InterPro
IPR036134. Crypto/Photolyase_FAD-like_sf.
IPR036155. Crypto/Photolyase_N_sf.
IPR005101. Cryptochr/Photolyase_FAD-bd.
IPR006050. DNA_photolyase_N.
IPR014729. Rossmann-like_a/b/a_fold.
PfamiView protein in Pfam
PF00875. DNA_photolyase. 1 hit.
PF03441. FAD_binding_7. 1 hit.
SUPFAMiSSF48173. SSF48173. 1 hit.
SSF52425. SSF52425. 1 hit.
PROSITEiView protein in PROSITE
PS51645. PHR_CRY_ALPHA_BETA. 1 hit.

Sequencei

Sequence statusi: Fragment.

D2HXW9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGVNAVHWFR KGLRLHDNPA LKECIQGADT IRCVYILDPW FAGSSNVGIN
60 70 80 90 100
RWRFLLQCLE DLDANLRKLN SRLFVIRGQP ADVFPRLFKE WNITKLSIEY
110 120 130 140 150
DSEPFGKERD AAIKKLATEA GVEVIVRISH TLYDLDKIIE LNGGQPPLTY
160 170 180 190 200
KRFQTLISKM EPLEIPVETI TSEVIEKCTT PLSDDHDEKY GVPSLEELGF
210 220 230 240 250
DTDGLPSAVW PGGETEALTR LERHLERKAW VANFERPRMN ANSLLASPTG
260 270 280 290 300
LSPYLRFGCL SCRLFYFKLT DLYKKVKKNS SPPLSLYGQL LWREFFYTAA
310 320 330 340 350
TNNPRFDKME GNPICVQIPW DKNPEALAKW AEGRTGFPWI DAIMTQLRQE
360 370 380 390 400
GWIHHLARHA VACFLTRGDL WISWEEGMKV FEELLLDADW SINAGSWMWL
410 420 430 440 450
SCSSFFQQFF HCYCPVGFGR RTDPNGDYIR RYLPVLRGFP AKYIYDPWNA
460 470 480 490 500
PEGIQKVAKC LIGVNYPKPM VNHAEASRLN IERMKQIYQQ LSRYRGLGLL
510 520 530 540 550
ASVPANPNGN GGLMGYSPGE NIPGCSSSGS CSQGSGILHY AHGDSQQTHL
560 570 580
LKQGRSSMGS GLSSGKRPSE EEDTQSIGPK VQRQSTN
Length:587
Mass (Da):66,455
Last modified:February 9, 2010 - v1
Checksum:i5DA38266D7896EEA
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei587Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACTA01004465 Genomic DNA. No translation available.
ACTA01012465 Genomic DNA. No translation available.
ACTA01020465 Genomic DNA. No translation available.
ACTA01028465 Genomic DNA. No translation available.
ACTA01036465 Genomic DNA. No translation available.
ACTA01044464 Genomic DNA. No translation available.
ACTA01172458 Genomic DNA. No translation available.
ACTA01180456 Genomic DNA. No translation available.
ACTA01188454 Genomic DNA. No translation available.
ACTA01196452 Genomic DNA. No translation available.
GL193654 Genomic DNA. Translation: EFB22605.1.
RefSeqiXP_002927704.1. XM_002927658.3.

Genome annotation databases

EnsembliENSAMET00000003013; ENSAMEP00000002891; ENSAMEG00000002720.
GeneIDi100484388.
KEGGiaml:100484388.

Similar proteinsi

Entry informationi

Entry nameiD2HXW9_AILME
AccessioniPrimary (citable) accession number: D2HXW9
Entry historyiIntegrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: October 25, 2017
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported