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D2HUG6

- D2HUG6_AILME

UniProt

D2HUG6 - D2HUG6_AILME

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Protein
Submitted name:

Putative uncharacterized protein

Gene

PANDA_015912

Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:PANDA_015912Imported
OrganismiAiluropoda melanoleuca (Giant panda)
Taxonomic identifieri9646 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda

Structurei

3D structure databases

ProteinModelPortaliD2HUG6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000259586.
KOiK00164.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Fragment.

D2HUG6-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MSQLRLLPSR LGVQASRFLA PHDIQMFNWR SRSSGPPATF PSGKRGGSSS
60 70 80 90 100
YMEEMYFAWL ENPQSVHKYW DSFFRKASEE GACDPTQPRF PESRPAVSSR
110 120 130 140 150
TETSKLVEDH LAVQSLIRAY QIRGHHVAQL DPLGILDADL DSFVPSDLIT
160 170 180 190 200
TIDKLAFYDL READLDKEFQ LPTTTFIGGP EHTLSLREII RRLESTYCQH
210 220 230 240 250
IGLEFMFIND VEQCQWIRQK FETPGVMQFS SEEKRTLLAR LVRSMRFEDF
260 270 280 290 300
LARKWSSEKR FGLEGCEVMI PALKTIIDKS SEMGIENVIL GMPHRGRLNV
310 320 330 340 350
LANVIRKDLE QIFCQFDPKL EAADEGSGDV KYHLGMYHER INRVTHRNIT
360 370 380 390 400
LSLVANPSHL EAVDPVVQGK TKAEQFYRGD AQGKKVMSIL VHGDAAFAGQ
410 420 430 440 450
GVVYETFHLS DLPSYTTNGT VHVVVNNQIG FTTDPRMARS SPYPTDVARV
460 470 480 490 500
VNAPIFHVNA DDPEAVIYVC SVAAEWRNTF NKDVVVDLVC YRRRGHNEMD
510 520 530 540 550
EPMFTQPLMY KQIHRQVPVL KKYADKLIAE GTVTLQEFEE EIAKYDRICE
560 570 580 590 600
EAYGRSKDKK ILHIKHWLDS PWPGFFNVDG EPKSMTCTAT GIPEDVLTHI
610 620 630 640 650
GEVASSVPVE DFKIHTGLSR ILRGRADMTK TRTVDWALAE YMAFGSLLKE
660 670 680 690 700
GIHVRLSGQD VERGTFSHRH HVLHDQEVDR RTCVPMNHLW PDQAPYTVCN
710 720 730 740 750
SSLSEYGVLG FELGYAMASP NALVLWEAQF GDFHNTAQCI IDQFISTGQA
760 770 780 790 800
KWVRHNGIVL LLPHGMEGMG PEHSSARPER FLQMSNDDSD AYPVFTEDFE
810 820 830 840 850
VSQLYDCNWI VVNCSTPANY FHVLRRQVLL PFRKPLIIFT PKSLLRHPEA
860 870 880 890 900
KCSFDQMVSG TSFQRVIPED GAAAQASEQV RRLIFCTGKV YYDLVKERSS
910 920 930 940 950
QGLEEQVAIT RLEQISPFPF DLIKREAEKY PGAELVWCQE EHKNMGYYDY
960 970 980 990 1000
ISPRFMTILS RARPIWYVGR DPAAAPATGN RNTHLVSLKK FLDTAFNLQA

FEGKTF
Length:1,006
Mass (Da):114,522
Last modified:February 9, 2010 - v1
Checksum:i8AD82FE39E923CB7
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1006 – 10061Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL193399 Genomic DNA. Translation: EFB19555.1.
RefSeqiXP_002926280.1. XM_002926234.1.

Genome annotation databases

GeneIDi100473974.
KEGGiaml:100473974.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL193399 Genomic DNA. Translation: EFB19555.1 .
RefSeqi XP_002926280.1. XM_002926234.1.

3D structure databases

ProteinModelPortali D2HUG6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 100473974.
KEGGi aml:100473974.

Organism-specific databases

CTDi 55753.

Phylogenomic databases

HOGENOMi HOG000259586.
KOi K00164.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The sequence and de novo assembly of the giant panda genome."
    Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J.
    , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J.
    Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD2HUG6_AILME
AccessioniPrimary (citable) accession number: D2HUG6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: October 29, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)