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D2HUG6

- D2HUG6_AILME

UniProt

D2HUG6 - D2HUG6_AILME

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Protein
Submitted name:

Putative uncharacterized protein

Gene
PANDA_015912
Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. oxoglutarate dehydrogenase (succinyl-transferring) activity Source: InterPro
  2. thiamine pyrophosphate binding Source: InterPro

GO - Biological processi

  1. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:PANDA_015912Imported
OrganismiAiluropoda melanoleuca (Giant panda)
Taxonomic identifieri9646 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda

Structurei

3D structure databases

ProteinModelPortaliD2HUG6.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000259586.
KOiK00164.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Fragment.

D2HUG6-1 [UniParc]FASTAAdd to Basket

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MSQLRLLPSR LGVQASRFLA PHDIQMFNWR SRSSGPPATF PSGKRGGSSS     50
YMEEMYFAWL ENPQSVHKYW DSFFRKASEE GACDPTQPRF PESRPAVSSR 100
TETSKLVEDH LAVQSLIRAY QIRGHHVAQL DPLGILDADL DSFVPSDLIT 150
TIDKLAFYDL READLDKEFQ LPTTTFIGGP EHTLSLREII RRLESTYCQH 200
IGLEFMFIND VEQCQWIRQK FETPGVMQFS SEEKRTLLAR LVRSMRFEDF 250
LARKWSSEKR FGLEGCEVMI PALKTIIDKS SEMGIENVIL GMPHRGRLNV 300
LANVIRKDLE QIFCQFDPKL EAADEGSGDV KYHLGMYHER INRVTHRNIT 350
LSLVANPSHL EAVDPVVQGK TKAEQFYRGD AQGKKVMSIL VHGDAAFAGQ 400
GVVYETFHLS DLPSYTTNGT VHVVVNNQIG FTTDPRMARS SPYPTDVARV 450
VNAPIFHVNA DDPEAVIYVC SVAAEWRNTF NKDVVVDLVC YRRRGHNEMD 500
EPMFTQPLMY KQIHRQVPVL KKYADKLIAE GTVTLQEFEE EIAKYDRICE 550
EAYGRSKDKK ILHIKHWLDS PWPGFFNVDG EPKSMTCTAT GIPEDVLTHI 600
GEVASSVPVE DFKIHTGLSR ILRGRADMTK TRTVDWALAE YMAFGSLLKE 650
GIHVRLSGQD VERGTFSHRH HVLHDQEVDR RTCVPMNHLW PDQAPYTVCN 700
SSLSEYGVLG FELGYAMASP NALVLWEAQF GDFHNTAQCI IDQFISTGQA 750
KWVRHNGIVL LLPHGMEGMG PEHSSARPER FLQMSNDDSD AYPVFTEDFE 800
VSQLYDCNWI VVNCSTPANY FHVLRRQVLL PFRKPLIIFT PKSLLRHPEA 850
KCSFDQMVSG TSFQRVIPED GAAAQASEQV RRLIFCTGKV YYDLVKERSS 900
QGLEEQVAIT RLEQISPFPF DLIKREAEKY PGAELVWCQE EHKNMGYYDY 950
ISPRFMTILS RARPIWYVGR DPAAAPATGN RNTHLVSLKK FLDTAFNLQA 1000
FEGKTF 1006
Length:1,006
Mass (Da):114,522
Last modified:February 9, 2010 - v1
Checksum:i8AD82FE39E923CB7
GO

Non-terminal residue

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1006 – 10061Imported

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL193399 Genomic DNA. Translation: EFB19555.1.
RefSeqiXP_002926280.1. XM_002926234.1.

Genome annotation databases

GeneIDi100473974.
KEGGiaml:100473974.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL193399 Genomic DNA. Translation: EFB19555.1 .
RefSeqi XP_002926280.1. XM_002926234.1.

3D structure databases

ProteinModelPortali D2HUG6.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 100473974.
KEGGi aml:100473974.

Organism-specific databases

CTDi 55753.

Phylogenomic databases

HOGENOMi HOG000259586.
KOi K00164.

Family and domain databases

Gene3Di 3.40.50.970. 2 hits.
InterProi IPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view ]
PANTHERi PTHR23152. PTHR23152. 1 hit.
Pfami PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view ]
PIRSFi PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTi SM00861. Transket_pyr. 1 hit.
[Graphical view ]
SUPFAMi SSF52518. SSF52518. 2 hits.
TIGRFAMsi TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The sequence and de novo assembly of the giant panda genome."
    Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J.
    , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J.
    Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD2HUG6_AILME
AccessioniPrimary (citable) accession number: D2HUG6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: June 11, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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