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D2HRC6 (D2HRC6_AILME) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:LOC100476155 Ensembl ENSAMEP00000014511
ORF Names:PANDA_014533 EMBL EFB19461.1
OrganismAiluropoda melanoleuca (Giant panda) [Reference proteome]
Taxonomic identifier9646 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda

Protein attributes

Sequence length244 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the GST superfamily. RuleBase RU003494

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Cellular_componentcytosol

Inferred from electronic annotation. Source: Ensembl

nucleus

Inferred from electronic annotation. Source: Ensembl

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue2441 EMBL EFB19461.1

Sequences

Sequence LengthMass (Da)Tools
D2HRC6 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: C2122F1D1F1043B2

FASTA24428,062
        10         20         30         40         50         60 
MRLELYLDLL SQPCRAVYIF AKKNDIPFKL CTTEVFKGQL LSKEFFQINR LRKVPVLKDG 

        70         80         90        100        110        120 
DFILTESSAI LIYLSSKYQT ADHWYPSDLQ ARARVHEYLG WHADCIRGTF GVPLWTRVMA 

       130        140        150        160        170        180 
PLIGVPVPEE KVQRNRTSMD RALQQLEDKF LGDRAFLAGQ QVSLADLMAL EELLQPVAVG 

       190        200        210        220        230        240 
YDLFEGRQRL AAWRERVEAF LGSDLLQETR GPILNILEQA VNKKVPNPPP EVYPYMLLRI 


SRIP 

« Hide

References

« Hide 'large scale' references
[1]"The sequence and de novo assembly of the giant panda genome."
Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Li J., Wang J.
Nature 0:0-0(2009)
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The sequence and de novo assembly of the giant panda genome."
Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J. expand/collapse author list , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J.
Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]Ensembl
Submitted (SEP-2011) to UniProtKB
Cited for: IDENTIFICATION.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
ACTA01067867 Genomic DNA. No translation available.
ACTA01075867 Genomic DNA. No translation available.
ACTA01083867 Genomic DNA. No translation available.
GL193215 Genomic DNA. Translation: EFB19461.1.
RefSeqXP_002925097.1. XM_002925051.1.

3D structure databases

ProteinModelPortalD2HRC6.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSAMET00000015117; ENSAMEP00000014511; ENSAMEG00000013776.
GeneID100476155.
KEGGaml:100476155.

Phylogenomic databases

GeneTreeENSGT00540000069741.
HOGENOMHOG000125747.
KOK00799.
OMAEDIWLNG.
OrthoDBEOG7V1FRJ.
TreeFamTF325759.

Family and domain databases

Gene3D1.20.1050.10. 1 hit.
3.40.30.10. 1 hit.
InterProIPR010987. Glutathione-S-Trfase_C-like.
IPR004045. Glutathione_S-Trfase_N.
IPR004046. GST_C.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PfamPF00043. GST_C. 1 hit.
PF13417. GST_N_3. 1 hit.
[Graphical view]
SUPFAMSSF47616. SSF47616. 1 hit.
SSF52833. SSF52833. 1 hit.
PROSITEPS50405. GST_CTER. 1 hit.
PS50404. GST_NTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2HRC6_AILME
AccessionPrimary (citable) accession number: D2HRC6
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: June 11, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)