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D2HLR1 (D2HLR1_AILME) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:LOC100475733 Ensembl ENSAMEP00000020540
ORF Names:PANDA_012450 EMBL EFB17903.1
OrganismAiluropoda melanoleuca (Giant panda) [Reference proteome]
Taxonomic identifier9646 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda

Protein attributes

Sequence length325 AA.
Sequence statusFragment.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Nucleus By similarity SAAS SAAS001766.

Sequence similarities

Contains fork-head DNA-binding domain. SAAS SAAS001766

Ontologies

Keywords
   Biological processTranscription
Transcription regulation SAAS SAAS001766
   Cellular componentNucleus SAAS SAAS001766
   LigandDNA-binding SAAS SAAS001766
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processaxon target recognition

Inferred from sequence or structural similarity. Source: UniProtKB

cell migration in diencephalon

Inferred from sequence or structural similarity. Source: UniProtKB

epithelial cell differentiation involved in mammary gland alveolus development

Inferred from sequence or structural similarity. Source: UniProtKB

floor plate development

Inferred from sequence or structural similarity. Source: UniProtKB

hypothalamus cell migration

Inferred from sequence or structural similarity. Source: UniProtKB

inferior colliculus development

Inferred from sequence or structural similarity. Source: UniProtKB

lactation

Inferred from sequence or structural similarity. Source: UniProtKB

mammary gland lobule development

Inferred from sequence or structural similarity. Source: UniProtKB

mammillary body development

Inferred from sequence or structural similarity. Source: UniProtKB

mammillothalamic axonal tract development

Inferred from sequence or structural similarity. Source: UniProtKB

midbrain development

Inferred from sequence or structural similarity. Source: UniProtKB

negative regulation of neuron apoptotic process

Inferred from sequence or structural similarity. Source: UniProtKB

somitogenesis

Inferred from sequence or structural similarity. Source: UniProtKB

spinal cord development

Inferred from electronic annotation. Source: Ensembl

telencephalon cell migration

Inferred from sequence or structural similarity. Source: UniProtKB

thalamus development

Inferred from electronic annotation. Source: Ensembl

transcription, DNA-templated

Inferred from electronic annotation. Source: UniProtKB-KW

urogenital system development

Inferred from electronic annotation. Source: Ensembl

visual learning

Inferred from sequence or structural similarity. Source: UniProtKB

   Cellular_componentnucleus

Inferred from sequence or structural similarity. Source: UniProtKB

   Molecular_functionsequence-specific DNA binding

Inferred from sequence or structural similarity. Source: UniProtKB

sequence-specific DNA binding transcription factor activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue3251 EMBL EFB17903.1

Sequences

Sequence LengthMass (Da)Tools
D2HLR1 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: 0AEE1B02B196111D

FASTA32535,008
        10         20         30         40         50         60 
MPRPGRNTYS DQKPPYSYIS LTAMAIQSSP EKMLPLSEIY KFIMDRFPYY RENTQRWQNS 

        70         80         90        100        110        120 
LRHNLSFNDC FIKIPRRPDQ PGKGSFWALH PSCGDMFENG SFLRRRKRFK VLKSDHLAPS 

       130        140        150        160        170        180 
KPADAAQYLQ QQAKLRLSAL AASGTHLPQM PAAAYNLGGV AQPSGFKHPF AIENIIAREY 

       190        200        210        220        230        240 
KMPGGLAFSA MQPVPAAYPL PNQLTTMSSS LGTGWPHVYG SAGMIDSATP ISMASGDYSA 

       250        260        270        280        290        300 
YGVPLKPLCH AAGQTLPAIP VPIKPTPAAV PALPALPAPI PTLLSNSPPS LSPTSSQTAT 

       310        320 
SQSSPATPSE TLTSPASALH SVAVH 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
ACTA01179549 Genomic DNA. No translation available.
GL193015 Genomic DNA. Translation: EFB17903.1.
RefSeqXP_002923327.1. XM_002923281.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSAMET00000021309; ENSAMEP00000020540; ENSAMEG00000019472.
GeneID100475733.
KEGGaml:100475733.

Phylogenomic databases

GeneTreeENSGT00740000115067.
HOGENOMHOG000007545.
KOK09395.
OMAFLSNSPQ.
OrthoDBEOG7C8GHD.
TreeFamTF350628.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR001766. TF_fork_head.
IPR018122. TF_fork_head_CS.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00250. Fork_head. 1 hit.
[Graphical view]
PRINTSPR00053. FORKHEAD.
SMARTSM00339. FH. 1 hit.
[Graphical view]
PROSITEPS00657. FORK_HEAD_1. 1 hit.
PS00658. FORK_HEAD_2. 1 hit.
PS50039. FORK_HEAD_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2HLR1_AILME
AccessionPrimary (citable) accession number: D2HLR1
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: April 16, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)