D2HLR1 (D2HLR1_AILME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Uncharacterized protein Ensembl ENSAMEP00000020540

Gene names

Name:	FOXB1 Ensembl ENSAMEP00000020540
ORF Names:	PANDA_012450 EMBL EFB17903.1

Organism

Ailuropoda melanoleuca (Giant panda) [Reference proteome]

Taxonomic identifier

9646 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Carnivora › Caniformia › Ursidae › Ailuropoda

Protein attributes

Sequence length	325 AA.
Sequence status	Fragment.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 fork-head DNA-binding domain. SAAS SAAS018122

Ontologies

Keywords
Biological process	Transcription Transcription regulation SAAS SAAS001766
Cellular component	Nucleus SAAS SAAS001766
Ligand	DNA-binding SAAS SAAS018122
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	axon target recognition Inferred from sequence or structural similarity. Source: UniProtKB cell migration in diencephalon Inferred from sequence or structural similarity. Source: UniProtKB epithelial cell differentiation involved in mammary gland alveolus development Inferred from sequence or structural similarity. Source: UniProtKB floor plate development Inferred from sequence or structural similarity. Source: UniProtKB hypothalamus cell migration Inferred from sequence or structural similarity. Source: UniProtKB inferior colliculus development Inferred from sequence or structural similarity. Source: UniProtKB lactation Inferred from sequence or structural similarity. Source: UniProtKB mammillothalamic axonal tract development Inferred from sequence or structural similarity. Source: UniProtKB negative regulation of neuron apoptotic process Inferred from sequence or structural similarity. Source: UniProtKB somitogenesis Inferred from sequence or structural similarity. Source: UniProtKB spinal cord development Inferred from electronic annotation. Source: Compara telencephalon cell migration Inferred from sequence or structural similarity. Source: UniProtKB thalamus development Inferred from electronic annotation. Source: Compara transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW urogenital system development Inferred from electronic annotation. Source: Compara visual learning Inferred from sequence or structural similarity. Source: UniProtKB
Cellular_component	nucleus Inferred from sequence or structural similarity. Source: UniProtKB
Molecular_function	sequence-specific DNA binding Inferred from sequence or structural similarity. Source: UniProtKB sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	325	1	EMBL EFB17903.1

Sequences

	Sequence		Length	Mass (Da)
	D2HLR1 [UniParc]. Last modified February 9, 2010. Version 1. Checksum: 0AEE1B02B196111D	FASTA	325	35,008
	10 20 30 40 50 60 MPRPGRNTYS DQKPPYSYIS LTAMAIQSSP EKMLPLSEIY KFIMDRFPYY RENTQRWQNS 70 80 90 100 110 120 LRHNLSFNDC FIKIPRRPDQ PGKGSFWALH PSCGDMFENG SFLRRRKRFK VLKSDHLAPS 130 140 150 160 170 180 KPADAAQYLQ QQAKLRLSAL AASGTHLPQM PAAAYNLGGV AQPSGFKHPF AIENIIAREY 190 200 210 220 230 240 KMPGGLAFSA MQPVPAAYPL PNQLTTMSSS LGTGWPHVYG SAGMIDSATP ISMASGDYSA 250 260 270 280 290 300 YGVPLKPLCH AAGQTLPAIP VPIKPTPAAV PALPALPAPI PTLLSNSPPS LSPTSSQTAT 310 320 SQSSPATPSE TLTSPASALH SVAVH

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The sequence and de novo assembly of the giant panda genome." Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J. , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J. Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[2]	Ensembl Submitted (SEP-2011) to UniProtKB Cited for: IDENTIFICATION.

Cross-references

Sequence databases
EMBL GenBank DDBJ	ACTA01179549 Genomic DNA. No translation available. GL193015 Genomic DNA. Translation: EFB17903.1.
RefSeq	XP_002923327.1. XM_002923281.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSAMET00000021309; ENSAMEP00000020540; ENSAMEG00000019472.
GeneID	100475733.
KEGG	aml:100475733.
Phylogenomic databases
GeneTree	ENSGT00700000104135.
HOGENOM	HOG000007545.
KO	K09395.
OMA	AREYKVP.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR001766. TF_fork_head. IPR018122. TF_fork_head_CS. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00250. Fork_head. 1 hit. [Graphical view]
PRINTS	PR00053. FORKHEAD.
SMART	SM00339. FH. 1 hit. [Graphical view]
PROSITE	PS00657. FORK_HEAD_1. 1 hit. PS00658. FORK_HEAD_2. 1 hit. PS50039. FORK_HEAD_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2HLR1_AILME

Accession

Primary (citable) accession number: D2HLR1

Entry history

Integrated into UniProtKB/TrEMBL:	February 9, 2010
Last sequence update:	February 9, 2010
Last modified:	May 1, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)