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D2HG44

- D2HG44_AILME

UniProt

D2HG44 - D2HG44_AILME

Protein
Submitted name:

Putative uncharacterized protein

Gene

PANDA_009931

Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed - Annotation score: 2 out of 5- Protein predictedi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (09 Feb 2010)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 calcium ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei381 – 3811UniRule annotation
    Active sitei381 – 3811 By similarity
    Active sitei440 – 4401UniRule annotation
    Active sitei440 – 4401 By similarity
    Active sitei463 – 4631UniRule annotation
    Metal bindingi503 – 5031CalciumUniRule annotation
    Metal bindingi505 – 5051CalciumUniRule annotation
    Metal bindingi552 – 5521CalciumUniRule annotation
    Metal bindingi557 – 5571CalciumUniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

    GO - Biological processi

    1. keratinocyte differentiation Source: Ensembl
    2. organ morphogenesis Source: Ensembl
    3. peptide cross-linking Source: InterPro

    Keywords - Ligandi

    CalciumUniRule annotation, Metal-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:PANDA_009931Imported
    OrganismiAiluropoda melanoleuca (Giant panda)
    Taxonomic identifieri9646 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda

    Subcellular locationi

    GO - Cellular componenti

    1. cell-cell adherens junction Source: Ensembl
    2. intrinsic component of membrane Source: Ensembl

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000231695.
    KOiK05619.

    Family and domain databases

    Gene3Di2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view]
    PANTHERiPTHR11590. PTHR11590. 1 hit.
    PfamiPF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
    SMARTiSM00460. TGc. 1 hit.
    [Graphical view]
    SUPFAMiSSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    D2HG44-1 [UniParc]FASTAAdd to Basket

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    MTDSPRSDVG RWGGNPWQPP TTPSPEPEPE PELDTRSRRG GRSFWARCCA    50
    CCSCRNGTDG DWGSEPHGDR GSRGRGSRSG SRRPDSRGSD SRRPGSRTGG 100
    VNAAGDGTIR EGMLVVTGVD LLSARSDQNR REHHTDEFEY DELIIRRGQP 150
    FHMVLHFSRP YESSDHVALE LVIGNNPEVG KGTHVIIPVG KGGSGGWKAQ 200
    VTKASGQNLN LRVHTSPNAI IGKFQFTVRT RSEAGEFQLP FDPHNEIYIL 250
    FNPWCPEDIV YVDHEDWRQE YVLNESGRIY YGTEAQIGER TWNYGQFDHG 300
    VLDACLYILD RRGMPYGGRG DPVSVSRVIS AMVNSLDDNG VLIGNWSGDY 350
    SRGTNPSAWV GSVEILLSYL RTGYSVPYGQ CWVFAGVTTT VLRCLGLATR 400
    TVTNFNSAHD TDTSLTMDIY FDENMKPLEH LNHDSVWNFH VWNDCWMKRP 450
    DLPSGFDGWQ VVDATPQETS SGIFCCGPCS VESIKNGLVY MKYDTPFIFA 500
    EVNSDKVYWQ RQDDGSFKIV YVEEKAIGTL IITKAVGSNM RDDVTYIYKH 550
    PEGSEAERKA VETAAAHGSK PNVYASRDSA EDVAMQVEAQ DAVMGQDLEV 600
    CVVLSNRGGS PRTVKLHLYL SVTFYTGVTG PVFKESKKEV VLAPGATDRV 650
    SMPVAYKEYR PQLVDQGSML LNVSGHVKES GQVLAKQHTF RLRTPDLSLT 700
    LLGAAVVGQE CEVQIVFKNP LPVTLTNVVF RLEGSGLQRP KILNVGDIGG 750
    NETVTLHQKF VPVRPGPRQL IASLDSPQLS QVHGVIQVDV APAPGGGGFF 800
    SDAGGNSGSG ETIPMASRGG A 821
    Length:821
    Mass (Da):90,045
    Last modified:February 9, 2010 - v1
    Checksum:iF229D2E883DBFB09
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei821 – 8211Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL192801 Genomic DNA. Translation: EFB17587.1.
    RefSeqiXP_002921111.1. XM_002921065.1.

    Genome annotation databases

    GeneIDi100473377.
    KEGGiaml:100473377.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL192801 Genomic DNA. Translation: EFB17587.1 .
    RefSeqi XP_002921111.1. XM_002921065.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 100473377.
    KEGGi aml:100473377.

    Organism-specific databases

    CTDi 7051.

    Phylogenomic databases

    HOGENOMi HOG000231695.
    KOi K05619.

    Family and domain databases

    Gene3Di 2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view ]
    PANTHERi PTHR11590. PTHR11590. 1 hit.
    Pfami PF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
    SMARTi SM00460. TGc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The sequence and de novo assembly of the giant panda genome."
      Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J.
      , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J.
      Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiD2HG44_AILME
    AccessioniPrimary (citable) accession number: D2HG44
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 9, 2010
    Last sequence update: February 9, 2010
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)