D2HG44 (D2HG44_AILME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EFB17587.1

Gene names

ORF Names:

PANDA_009931 EMBL EFB17587.1

Organism

Ailuropoda melanoleuca (Giant panda)

Taxonomic identifier

9646 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Carnivora › Caniformia › Ursidae › Ailuropoda

Protein attributes

Sequence length	821 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Binds 1 calcium ion per subunit By similarity. PIRSR PIRSR000459-2

Ontologies

Keywords
Ligand	Calcium PIRSR PIRSR000459-2 Metal-binding PIRSR PIRSR000459-2
Gene Ontology (GO)
Biological_process	keratinocyte differentiation Inferred from electronic annotation. Source: Compara organ morphogenesis Inferred from electronic annotation. Source: Compara peptide cross-linking Inferred from electronic annotation. Source: InterPro
Cellular_component	cell-cell adherens junction Inferred from electronic annotation. Source: Compara intrinsic to membrane Inferred from electronic annotation. Source: Compara
Molecular_function	metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW protein-glutamine gamma-glutamyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	381	1	By similarity PIRSR PIRSR000459-1
	Active site	440	1	By similarity PIRSR PIRSR000459-1
	Active site	463	1	By similarity PIRSR PIRSR000459-1
	Metal binding	503	1	Calcium By similarity PIRSR PIRSR000459-2
	Metal binding	505	1	Calcium By similarity PIRSR PIRSR000459-2
	Metal binding	552	1	Calcium By similarity PIRSR PIRSR000459-2
	Metal binding	557	1	Calcium By similarity PIRSR PIRSR000459-2
Experimental info
	Non-terminal residue	821	1	EMBL EFB17587.1

Sequences

	Sequence		Length	Mass (Da)
	D2HG44 [UniParc]. Last modified February 9, 2010. Version 1. Checksum: F229D2E883DBFB09	FASTA	821	90,045
	10 20 30 40 50 60 MTDSPRSDVG RWGGNPWQPP TTPSPEPEPE PELDTRSRRG GRSFWARCCA CCSCRNGTDG 70 80 90 100 110 120 DWGSEPHGDR GSRGRGSRSG SRRPDSRGSD SRRPGSRTGG VNAAGDGTIR EGMLVVTGVD 130 140 150 160 170 180 LLSARSDQNR REHHTDEFEY DELIIRRGQP FHMVLHFSRP YESSDHVALE LVIGNNPEVG 190 200 210 220 230 240 KGTHVIIPVG KGGSGGWKAQ VTKASGQNLN LRVHTSPNAI IGKFQFTVRT RSEAGEFQLP 250 260 270 280 290 300 FDPHNEIYIL FNPWCPEDIV YVDHEDWRQE YVLNESGRIY YGTEAQIGER TWNYGQFDHG 310 320 330 340 350 360 VLDACLYILD RRGMPYGGRG DPVSVSRVIS AMVNSLDDNG VLIGNWSGDY SRGTNPSAWV 370 380 390 400 410 420 GSVEILLSYL RTGYSVPYGQ CWVFAGVTTT VLRCLGLATR TVTNFNSAHD TDTSLTMDIY 430 440 450 460 470 480 FDENMKPLEH LNHDSVWNFH VWNDCWMKRP DLPSGFDGWQ VVDATPQETS SGIFCCGPCS 490 500 510 520 530 540 VESIKNGLVY MKYDTPFIFA EVNSDKVYWQ RQDDGSFKIV YVEEKAIGTL IITKAVGSNM 550 560 570 580 590 600 RDDVTYIYKH PEGSEAERKA VETAAAHGSK PNVYASRDSA EDVAMQVEAQ DAVMGQDLEV 610 620 630 640 650 660 CVVLSNRGGS PRTVKLHLYL SVTFYTGVTG PVFKESKKEV VLAPGATDRV SMPVAYKEYR 670 680 690 700 710 720 PQLVDQGSML LNVSGHVKES GQVLAKQHTF RLRTPDLSLT LLGAAVVGQE CEVQIVFKNP 730 740 750 760 770 780 LPVTLTNVVF RLEGSGLQRP KILNVGDIGG NETVTLHQKF VPVRPGPRQL IASLDSPQLS 790 800 810 820 QVHGVIQVDV APAPGGGGFF SDAGGNSGSG ETIPMASRGG A

References

[1]

"The sequence and de novo assembly of the giant panda genome." Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J. , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J. Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL192801 Genomic DNA. Translation: EFB17587.1.
RefSeq	XP_002921111.1. XM_002921065.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	100473377.
KEGG	aml:100473377.
Organism-specific databases
CTD	7051.
Phylogenomic databases
HOGENOM	HOG000231695.
KO	K05619.
Family and domain databases
Gene3D	2.60.40.10. 3 hits.
InterPro	IPR023608. Gln_gamma-glutamylTfrase_euk. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. IPR002931. Transglutaminase-like. IPR008958. Transglutaminase_C. IPR013808. Transglutaminase_CS. IPR001102. Transglutaminase_N. [Graphical view]
PANTHER	PTHR11590. PTHR11590. 1 hit.
Pfam	PF00927. Transglut_C. 2 hits. PF01841. Transglut_core. 1 hit. PF00868. Transglut_N. 1 hit. [Graphical view]
PIRSF	PIRSF000459. TGM_EBP42. 1 hit.
SMART	SM00460. TGc. 1 hit. [Graphical view]
SUPFAM	SSF81296. Ig_E-set. 1 hit. SSF49309. Transglut_C. 2 hits.
PROSITE	PS00547. TRANSGLUTAMINASES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2HG44_AILME

Accession

Primary (citable) accession number: D2HG44

Entry history

Integrated into UniProtKB/TrEMBL:	February 9, 2010
Last sequence update:	February 9, 2010
Last modified:	March 6, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)