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Protein
Submitted name:

Putative uncharacterized protein

Gene

PANDA_009931

Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Cofactori

Note: Binds 1 calcium ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei381 – 3811UniRule annotation
Active sitei440 – 4401UniRule annotation
Active sitei463 – 4631UniRule annotation
Metal bindingi503 – 5031CalciumUniRule annotation
Metal bindingi505 – 5051CalciumUniRule annotation
Metal bindingi552 – 5521CalciumUniRule annotation
Metal bindingi557 – 5571CalciumUniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. protein-glutamine gamma-glutamyltransferase activity Source: InterPro

GO - Biological processi

  1. keratinocyte differentiation Source: Ensembl
  2. organ morphogenesis Source: Ensembl
  3. peptide cross-linking Source: InterPro
Complete GO annotation...

Keywords - Ligandi

CalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:PANDA_009931Imported
OrganismiAiluropoda melanoleuca (Giant panda)
Taxonomic identifieri9646 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda

Subcellular locationi

GO - Cellular componenti

  1. cell-cell adherens junction Source: Ensembl
  2. extracellular vesicular exosome Source: Ensembl
  3. intrinsic component of membrane Source: Ensembl
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000231695.
KOiK05619.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

D2HG44-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTDSPRSDVG RWGGNPWQPP TTPSPEPEPE PELDTRSRRG GRSFWARCCA
60 70 80 90 100
CCSCRNGTDG DWGSEPHGDR GSRGRGSRSG SRRPDSRGSD SRRPGSRTGG
110 120 130 140 150
VNAAGDGTIR EGMLVVTGVD LLSARSDQNR REHHTDEFEY DELIIRRGQP
160 170 180 190 200
FHMVLHFSRP YESSDHVALE LVIGNNPEVG KGTHVIIPVG KGGSGGWKAQ
210 220 230 240 250
VTKASGQNLN LRVHTSPNAI IGKFQFTVRT RSEAGEFQLP FDPHNEIYIL
260 270 280 290 300
FNPWCPEDIV YVDHEDWRQE YVLNESGRIY YGTEAQIGER TWNYGQFDHG
310 320 330 340 350
VLDACLYILD RRGMPYGGRG DPVSVSRVIS AMVNSLDDNG VLIGNWSGDY
360 370 380 390 400
SRGTNPSAWV GSVEILLSYL RTGYSVPYGQ CWVFAGVTTT VLRCLGLATR
410 420 430 440 450
TVTNFNSAHD TDTSLTMDIY FDENMKPLEH LNHDSVWNFH VWNDCWMKRP
460 470 480 490 500
DLPSGFDGWQ VVDATPQETS SGIFCCGPCS VESIKNGLVY MKYDTPFIFA
510 520 530 540 550
EVNSDKVYWQ RQDDGSFKIV YVEEKAIGTL IITKAVGSNM RDDVTYIYKH
560 570 580 590 600
PEGSEAERKA VETAAAHGSK PNVYASRDSA EDVAMQVEAQ DAVMGQDLEV
610 620 630 640 650
CVVLSNRGGS PRTVKLHLYL SVTFYTGVTG PVFKESKKEV VLAPGATDRV
660 670 680 690 700
SMPVAYKEYR PQLVDQGSML LNVSGHVKES GQVLAKQHTF RLRTPDLSLT
710 720 730 740 750
LLGAAVVGQE CEVQIVFKNP LPVTLTNVVF RLEGSGLQRP KILNVGDIGG
760 770 780 790 800
NETVTLHQKF VPVRPGPRQL IASLDSPQLS QVHGVIQVDV APAPGGGGFF
810 820
SDAGGNSGSG ETIPMASRGG A
Length:821
Mass (Da):90,045
Last modified:February 9, 2010 - v1
Checksum:iF229D2E883DBFB09
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei821 – 8211Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL192801 Genomic DNA. Translation: EFB17587.1.
RefSeqiXP_002921111.1. XM_002921065.1.

Genome annotation databases

GeneIDi100473377.
KEGGiaml:100473377.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL192801 Genomic DNA. Translation: EFB17587.1.
RefSeqiXP_002921111.1. XM_002921065.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100473377.
KEGGiaml:100473377.

Organism-specific databases

CTDi7051.

Phylogenomic databases

HOGENOMiHOG000231695.
KOiK05619.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The sequence and de novo assembly of the giant panda genome."
    Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J.
    , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J.
    Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiD2HG44_AILME
AccessioniPrimary (citable) accession number: D2HG44
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: November 26, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.