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Protein
Submitted name:

Uncharacterized protein

Gene

B3GALT4

Organism
Ailuropoda melanoleuca (Giant panda)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosyltransferaseSAAS annotation, Transferase

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:B3GALT4Imported
ORF Names:PANDA_002274Imported
OrganismiAiluropoda melanoleuca (Giant panda)
Taxonomic identifieri9646 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda
ProteomesiUP000008912 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Golgi apparatusSAAS annotation, Membrane

Interactioni

Protein-protein interaction databases

STRINGi9646.ENSAMEP00000020805.

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

GeneTreeiENSGT00790000123046.
HOGENOMiHOG000064523.
KOiK00715.
OMAiPFCSWLQ.
OrthoDBiEOG76MK8S.
TreeFamiTF318639.

Family and domain databases

InterProiIPR002659. Glyco_trans_31.
[Graphical view]
PANTHERiPTHR11214. PTHR11214. 1 hit.
PfamiPF01762. Galactosyl_T. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

D2GZ00-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLSLFRRLL LAALLLVIIW TLFGPSGIGE ELLSLSLASL RPAPASPGPP
60 70 80 90 100
LALPRLLIPN EEACRGPGAP PFLLILVCTA PDNLNQRNAI RASWGGLREA
110 120 130 140 150
RGLRVQTLFL LGEPSLWHPT REPHGIDLVQ EAAVQGDILQ AAFRDSYRNL
160 170 180 190 200
TLKTLSGLNW ANKHCSMARY ILKTDDDVFV NVPELVSELI RRGGRWEQWE
210 220 230 240 250
KGKEPPPREV EVGDEDWEVG SVLRSQPTPL LYLGRVHWRV HPSRTPGSKH
260 270 280 290 300
QISEEQWPPT WGPFPPYASG TGYVLSASAV QLILKVASRA PSLPLEDVFV
310 320 330 340 350
GVSARRGGLT PTHCVKLAGA THYPLDRCCY GKFLLTSHKL DPWKMQEAWK
360 370 380
LVGGSEGERT APFCSWLQEV LGILRCRVIA WLHS
Length:384
Mass (Da):42,594
Last modified:February 9, 2010 - v1
Checksum:iD934F312AFBFA4E1
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei384 – 3841Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACTA01154655 Genomic DNA. No translation available.
GL192386 Genomic DNA. Translation: EFB14051.1.
RefSeqiXP_002914377.1. XM_002914331.2.

Genome annotation databases

EnsembliENSAMET00000021574; ENSAMEP00000020805; ENSAMEG00000019752.
GeneIDi100474436.
KEGGiaml:100474436.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ACTA01154655 Genomic DNA. No translation available.
GL192386 Genomic DNA. Translation: EFB14051.1.
RefSeqiXP_002914377.1. XM_002914331.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9646.ENSAMEP00000020805.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSAMET00000021574; ENSAMEP00000020805; ENSAMEG00000019752.
GeneIDi100474436.
KEGGiaml:100474436.

Organism-specific databases

CTDi8705.

Phylogenomic databases

GeneTreeiENSGT00790000123046.
HOGENOMiHOG000064523.
KOiK00715.
OMAiPFCSWLQ.
OrthoDBiEOG76MK8S.
TreeFamiTF318639.

Family and domain databases

InterProiIPR002659. Glyco_trans_31.
[Graphical view]
PANTHERiPTHR11214. PTHR11214. 1 hit.
PfamiPF01762. Galactosyl_T. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The sequence and de novo assembly of the giant panda genome."
    Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J.
    , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J.
    Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Ensembl
    Submitted (SEP-2011) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiD2GZ00_AILME
AccessioniPrimary (citable) accession number: D2GZ00
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: June 24, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.