D2GW12 (D2GW12_AILME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EFB19405.1

Gene names

ORF Names:

PANDA_000958 EMBL EFB19405.1

Organism

Ailuropoda melanoleuca (Giant panda)

Taxonomic identifier

9646 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Laurasiatheria › Carnivora › Caniformia › Ursidae › Ailuropoda

Protein attributes

Sequence length	672 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Gene Ontology (GO)
Biological_process	lipid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	acetoacetate-CoA ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	672	1	EMBL EFB19405.1

Sequences

	Sequence		Length	Mass (Da)
	D2GW12 [UniParc]. Last modified February 9, 2010. Version 1. Checksum: 0646944D7CD363EB	FASTA	672	74,657
	10 20 30 40 50 60 MSKQLRASRE EILECQVMWE PDSKKDTQMD RFRAAVGAAC GLALENYDDV YHWSVESYPD 70 80 90 100 110 120 FWAEFWKFSG IVFSRMYDEV VDTSKGIADV PEWFKGSRLN YAENLLRHKE NDRVALYAAR 130 140 150 160 170 180 EGKEEIVKVT FEELRQQVAL FAAAMRKMGV KQGDRVVGYL PNGVHAVEAM LAAASIGAIW 190 200 210 220 230 240 SSTSPDFGVN GVLDRFSQIQ PKLIFSVEAV VYNGKEYSHM DKLQRVVKGL PDLKKVVLIP 250 260 270 280 290 300 YIASKEKIDI SKIPNSVFLD DFLATRKGEQ APQLEFEQLP FSHPLFIMFS SGTTGAPKCM 310 320 330 340 350 360 VHSAGGTLIQ HLKEHVLHGN MGSGDIMLYY TTVGWMMWNW MVSALATGAA VVLYDGSPLV 370 380 390 400 410 420 PTPNVLWDLV DRIGITILGT GAKWLAVLEE KNMKPAETHS LQTLHTILST GSPLKAQSYD 430 440 450 460 470 480 YVYSCVKSGV LLGSISGGTD IISCFMGQNF SIPVYKGEIQ ARNLGMAVEA WNEEGKAVWG 490 500 510 520 530 540 ESGELVCTKP IPCQPTHFWN DENGSKYRKA YFSRFPGVWA HGDYCKINPK TGGIIMLGRS 550 560 570 580 590 600 DGTLNPSGVR FGSSEIYNIV EAFEEVMDSL CVPQYNKDGE ERVLLFLKMA SGHSFGPELV 610 620 630 640 650 660 KSIRNAIRVG LSARHVPSLI LETKGIPYTL NGKKVEVAVK QIIAGKAVEH RGAFSNPETL 670 DLYRDIPELH GF

References

[1]

"The sequence and de novo assembly of the giant panda genome." Li R., Fan W., Tian G., Zhu H., He L., Cai J., Huang Q., Cai Q., Li B., Bai Y., Zhang Z., Zhang Y., Wang W., Li J., Wei F., Li H., Jian M., Li J. , Zhang Z., Nielsen R., Li D., Gu W., Yang Z., Xuan Z., Ryder O.A., Leung F.C., Zhou Y., Cao J., Sun X., Fu Y., Fang X., Guo X., Wang B., Hou R., Shen F., Mu B., Ni P., Lin R., Qian W., Wang G., Yu C., Nie W., Wang J., Wu Z., Liang H., Min J., Wu Q., Cheng S., Ruan J., Wang M., Shi Z., Wen M., Liu B., Ren X., Zheng H., Dong D., Cook K., Shan G., Zhang H., Kosiol C., Xie X., Lu Z., Zheng H., Li Y., Steiner C.C., Lam T.T., Lin S., Zhang Q., Li G., Tian J., Gong T., Liu H., Zhang D., Fang L., Ye C., Zhang J., Hu W., Xu A., Ren Y., Zhang G., Bruford M.W., Li Q., Ma L., Guo Y., An N., Hu Y., Zheng Y., Shi Y., Li Z., Liu Q., Chen Y., Zhao J., Qu N., Zhao S., Tian F., Wang X., Wang H., Xu L., Liu X., Vinar T., Wang Y., Lam T.W., Yiu S.M., Liu S., Zhang H., Li D., Huang Y., Wang X., Yang G., Jiang Z., Wang J., Qin N., Li L., Li J., Bolund L., Kristiansen K., Wong G.K., Olson M., Zhang X., Li S., Yang H., Wang J., Wang J. Nature 463:311-317(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	GL192354 Genomic DNA. Translation: EFB19405.1.
RefSeq	XP_002913152.1. XM_002913106.1.
3D structure databases
ProteinModelPortal	D2GW12.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	100474264.
KEGG	aml:100474264.
Phylogenomic databases
HOGENOM	HOG000229992.
KO	K01907.
Family and domain databases
InterPro	IPR005914. Acac_CoA_synth. IPR024597. Acyl-CoA_synth_DUF3448. IPR020845. AMP-binding_CS. IPR000873. AMP-dep_Synth/Lig. [Graphical view]
Pfam	PF00501. AMP-binding. 1 hit. PF11930. DUF3448. 1 hit. [Graphical view]
TIGRFAMs	TIGR01217. ac_ac_CoA_syn. 1 hit.
PROSITE	PS00455. AMP_BINDING. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2GW12_AILME

Accession

Primary (citable) accession number: D2GW12

Entry history

Integrated into UniProtKB/TrEMBL:	February 9, 2010
Last sequence update:	February 9, 2010
Last modified:	October 3, 2012
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)