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D2GVH4 (D2GVH4_AILME) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:LOC100481969 Ensembl ENSAMEP00000018700
ORF Names:PANDA_000726 EMBL EFB24253.1
OrganismAiluropoda melanoleuca (Giant panda) [Reference proteome]
Taxonomic identifier9646 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaUrsidaeAiluropoda

Protein attributes

Sequence length322 AA.
Sequence statusFragment.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processCD8-positive, alpha-beta T cell differentiation

Inferred from electronic annotation. Source: Ensembl

apoptotic process

Inferred from electronic annotation. Source: Ensembl

cell cycle arrest

Inferred from electronic annotation. Source: Ensembl

cellular response to interferon-beta

Inferred from electronic annotation. Source: Ensembl

cellular response to mechanical stimulus

Inferred from electronic annotation. Source: Ensembl

defense response to virus

Inferred from electronic annotation. Source: Ensembl

interferon-gamma-mediated signaling pathway

Inferred from electronic annotation. Source: Ensembl

negative regulation of regulatory T cell differentiation

Inferred from electronic annotation. Source: Ensembl

positive regulation of interferon-beta production

Inferred from electronic annotation. Source: Ensembl

positive regulation of interleukin-12 biosynthetic process

Inferred from electronic annotation. Source: Ensembl

positive regulation of transcription from RNA polymerase II promoter

Inferred from electronic annotation. Source: Ensembl

regulation of CD8-positive, alpha-beta T cell proliferation

Inferred from electronic annotation. Source: Ensembl

regulation of MyD88-dependent toll-like receptor signaling pathway

Inferred from electronic annotation. Source: Ensembl

transcription, DNA-templated

Inferred from electronic annotation. Source: UniProtKB-KW

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: Ensembl

nuclear chromatin

Inferred from electronic annotation. Source: Ensembl

   Molecular_functionRNA polymerase II core promoter proximal region sequence-specific DNA binding

Inferred from electronic annotation. Source: Ensembl

sequence-specific DNA binding transcription factor activity

Inferred from electronic annotation. Source: Ensembl

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue3221 EMBL EFB24253.1

Sequences

Sequence LengthMass (Da)Tools
D2GVH4 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: 5B08905637ACC6A4

FASTA32236,083
        10         20         30         40         50         60 
MPITRMRMRP WLEMQINSNQ IPGLIWINKE EMIFQIPWKH AAKHGWDINK DACLFRSWAI 

        70         80         90        100        110        120 
HTGRYKAGEK EPDPKTWKAN FRCAMNSLPD IEEVKDQSRN KGSSAVRVYR MLPPLTKNQR 

       130        140        150        160        170        180 
KERKSKSSRD AKSKAKRKSC GDSSPDTFSD GLSSSTLPDD HSSYTAQGYV GQDLEVERDL 

       190        200        210        220        230        240 
TPALSPCAVT STLPDWRIPV EIVPDSTSDL YNFQVSPMPS TSEATTDEDE EGKLTEDIMK 

       250        260        270        280        290        300 
LLEQTGWQPT NVDGKGYLLN EPGAQPTSLY GDFSCKEEPE VDSPGGYIGL ISSDLKNMDT 

       310        320 
SWLDSLLPPV RLPSIQAIPC AP 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
ACTA01008157 Genomic DNA. No translation available.
GL192350 Genomic DNA. Translation: EFB24253.1.
RefSeqXP_002912943.1. XM_002912897.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSAMET00000019449; ENSAMEP00000018700; ENSAMEG00000017694.
GeneID100481969.
KEGGaml:100481969.

Phylogenomic databases

GeneTreeENSGT00740000114956.
HOGENOMHOG000037937.
KOK09444.
OMACKEEPEV.
OrthoDBEOG72ZCFD.
TreeFamTF328512.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
InterProIPR017431. Interferon_reg_fac-1/2.
IPR019817. Interferon_reg_fac_CS.
IPR001346. Interferon_reg_fact_DNA-bd_dom.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00605. IRF. 1 hit.
[Graphical view]
PIRSFPIRSF038196. IFN_RF1/2. 1 hit.
PRINTSPR00267. INTFRNREGFCT.
SMARTSM00348. IRF. 1 hit.
[Graphical view]
PROSITEPS00601. IRF_1. 1 hit.
PS51507. IRF_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2GVH4_AILME
AccessionPrimary (citable) accession number: D2GVH4
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: July 9, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)