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D2C1L9 (D2C1L9_DICD5) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD EMBL ACZ77163.1
EC=3.5.1.28 EMBL ACZ77163.1
Gene names
Ordered Locus Names:Dd586_2312
OrganismDickeya dadantii (strain Ech586) [Complete proteome] [HAMAP] EMBL ACZ77163.1
Taxonomic identifier590409 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Dickeya ›

Protein attributes

Sequence length290 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ACZ77163.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpeptidoglycan catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionN-acetylmuramoyl-L-alanine amidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
D2C1L9 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: E3EE60F827770BBB

FASTA29032,411
        10         20         30         40         50         60 
MTRKAIRLVW RSAVLMAVIV LAGCQTRERY VDEGDYQLDL SSKAVSRGER VRFLVLHYTA 

        70         80         90        100        110        120 
EDLDSSLETL TAEQVSAHYL VPAYPPRVNG KPVAWKLVPE SQAAWHAGAS YWRGYSQLNA 

       130        140        150        160        170        180 
TSVGIEQENP GWRQTASGTH WWQPYTPQQI ALVTSLARDI IARHHIAPQD VVGHSDIAPQ 

       190        200        210        220        230        240 
RKVDPGPLFP WRQLAASGIG AWPDAARVRF YMGDRGKTMP VDRTVLLTKL ACYGYEVKEG 

       250        260        270        280        290 
MSERQQKRVV AAFQMHFRQQ RYDGEADAET EAIADALLEK YGVASCKGAA

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References

[1]"Complete sequence of Dickeya dadantii Ech586."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Balakrishnan V., Glasner J., Perna N.T.
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ech586.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001836 Genomic DNA. Translation: ACZ77163.1.
RefSeqYP_003333868.1. NC_013592.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACZ77163; ACZ77163; Dd586_2312.
GeneID8661253.
KEGGddc:Dd586_2312.
PATRIC32071366. VBIDicDad110536_2331.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000255964.
KOK11066.

Enzyme and pathway databases

BioCycDDAD590409:GHDW-2360-MONOMER.

Family and domain databases

Gene3D3.40.80.10. 1 hit.
InterProIPR002502. Amidase_domain.
IPR002477. Peptidoglycan-bd-like.
[Graphical view]
PfamPF01510. Amidase_2. 1 hit.
[Graphical view]
SMARTSM00644. Ami_2. 1 hit.
[Graphical view]
SUPFAMSSF55846. Amidase_2. 1 hit.
SSF47090. PGBD_like. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD2C1L9_DICD5
AccessionPrimary (citable) accession number: D2C1L9
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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