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D2C1B8 (D2C1B8_DICD5) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595

Short name=PEPC HAMAP-Rule MF_00595
Short name=PEPCase HAMAP-Rule MF_00595
EC=4.1.1.31 HAMAP-Rule MF_00595
Gene names
Name:ppc HAMAP-Rule MF_00595
Ordered Locus Names:Dd586_0182 EMBL ACZ75079.1
OrganismDickeya dadantii (strain Ech586) [Complete proteome] [HAMAP] EMBL ACZ75079.1
Taxonomic identifier590409 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya

Protein attributes

Sequence length879 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 SAAS SAAS022805

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. HAMAP-Rule MF_00595 SAAS SAAS021135

Cofactor

Magnesium By similarity. HAMAP-Rule MF_00595 SAAS SAAS021135

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00595

Sequence similarities

Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1381 By similarity HAMAP-Rule MF_00595
Active site5461 By similarity HAMAP-Rule MF_00595

Sequences

Sequence LengthMass (Da)Tools
D2C1B8 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: 249D12D84E419A9B

FASTA87999,131
        10         20         30         40         50         60 
MNEQYSAMRS NVSMLGKLLG DTIKDALGAN ILERVETIRK LSKASRAGSE THRQELLTTL 

        70         80         90        100        110        120 
QNLSNEELLP VARAFSQFLN LTNTAEQYHS ISPHGEAASN PEALATVFRN LKSRDNLSDK 

       130        140        150        160        170        180 
DIRNAVESLS IELVLTAHPT EITRRTLIHK LVEVNTCLKQ LDHNDLADYE RHQIMRRLRQ 

       190        200        210        220        230        240 
LIAQYWHTDE IRKIRPTPVD EAKWGFAVVE NSLWEGVPAF LRELDEQMDK ELGYRLPVDS 

       250        260        270        280        290        300 
VPVRFTSWMG GDRDGNPNVT SEITRRVLLL SRWKAADLFL RDVQVLVSEL SMTTCTPKLQ 

       310        320        330        340        350        360 
QLAGGDEVQE PYRELMKNLR AQLTATLDYL DARLKGEQRV PPNDLLVTND QLWEPLYACY 

       370        380        390        400        410        420 
QSLHACGMGI IADGQLLDTL RRVRCFGVPL VRIDVRQEST RHTDALAEIT RYLGLGDYES 

       430        440        450        460        470        480 
WSESDKQAFL IRELNSKRPL LPRQWEPSAD TQEVLETCRV IAETPRDSIA AYVISMARTP 

       490        500        510        520        530        540 
SDVLAVHLLL KEAGCPYSLP VAPLFETLDD LNNADSVMIQ LLNIDWYRGF IQGKQMVMIG 

       550        560        570        580        590        600 
YSDSAKDAGV MAASWAQYRA QDALIKTCEK YGIALTLFHG RGGSIGRGGA PAHAALLSQP 

       610        620        630        640        650        660 
PGSLKGGLRV TEQGEMIRFK FGLPEVTISS LSLYTSAILE ANLLPPPEPK PEWHHIMDEL 

       670        680        690        700        710        720 
SRISCDMYRG YVRENPDFVP YFRAATPELE LGKLPLGSRP AKRRPNGGVE SLRAIPWIFA 

       730        740        750        760        770        780 
WTQNRLMLPA WLGAGAALQD VIDKGHQSQL ETMCRDWPFF STRIGMLEMV FAKADLWLAE 

       790        800        810        820        830        840 
YYDQRLVDEK LWSLGKQLRE QLEKDIQAVL TISNDDHLMA DLPWIAESIA LRNVYTDPLN 

       850        860        870 
VLQAELLHRS RQQDMTDPQV EQALMVTIAG VAAGMRNTG 

« Hide

References

[1]"Complete sequence of Dickeya dadantii Ech586."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Balakrishnan V., Glasner J., Perna N.T.
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ech586 EMBL ACZ75079.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001836 Genomic DNA. Translation: ACZ75079.1.
RefSeqYP_003331784.1. NC_013592.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACZ75079; ACZ75079; Dd586_0182.
GeneID8659075.
KEGGddc:Dd586_0182.
PATRIC32066989. VBIDicDad110536_0185.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000238648.
KOK01595.
OrthoDBEOG6TJ7T8.

Enzyme and pathway databases

BioCycDDAD590409:GHDW-182-MONOMER.

Family and domain databases

HAMAPMF_00595. PEPcase_type1.
InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2C1B8_DICD5
AccessionPrimary (citable) accession number: D2C1B8
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: February 19, 2014
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)