D2C0M0 (D2C0M0_DICD5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Ordered Locus Names:

Dd586_0065

Organism

Dickeya dadantii (strain Ech586) [Complete proteome] [HAMAP] EMBL ACZ74963.1

Taxonomic identifier

590409 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Dickeya › Dickeya dadantii

Protein attributes

Sequence length	208 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU000414 EMBL ACZ74963.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2C0M0 [UniParc]. Last modified February 9, 2010. Version 1. Checksum: 2E7E4660FFA4D7EF	FASTA	208	23,173
	10 20 30 40 50 60 MSYSLPSLPY AYDALEPHFD AQTMEIHHSK HHQAYVNNAN AALESLPEFA SLSAEELITK 70 80 90 100 110 120 LDQLPADKKG PLRNNAGGHA NHSLFWKGLK LGTTLEGELK AAIERDFGSV DEFKTKFEQA 130 140 150 160 170 180 AATRFGSGWA WLVLKDDGKL AVVSTANQDS PLMGEAISGA SGYPLIALDV WEHAYYLKYQ 190 200 NRRPDYIKAF WSVVNWDEAA KRFAEAKK

References

[1]

"Complete sequence of Dickeya dadantii Ech586." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. , Balakrishnan V., Glasner J., Perna N.T. Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Ech586.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001836 Genomic DNA. Translation: ACZ74963.1.
RefSeq	YP_003331668.1. NC_013592.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACZ74963; ACZ74963; Dd586_0065.
GeneID	8658958.
KEGG	ddc:Dd586_0065.
PATRIC	32066755. VBIDicDad110536_0067.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000013583.
KO	K04564.
Enzyme and pathway databases
BioCyc	DDAD590409:GHDW-65-MONOMER.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

D2C0M0_DICD5

Accession

Primary (citable) accession number: D2C0M0

Entry history

Integrated into UniProtKB/TrEMBL:	February 9, 2010
Last sequence update:	February 9, 2010
Last modified:	May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)