Skip Header

Contribute Send feedback
Read comments (?) or add your own

D2C0J9 (D2C0J9_DICD5) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Glycine--tRNA ligase alpha subunit HAMAP-Rule MF_00254
EC=6.1.1.14 HAMAP-Rule MF_00254
Alternative name(s):
Glycyl-tRNA synthetase alpha subunit HAMAP-Rule MF_00254
Gene names
Name:glyQ HAMAP-Rule MF_00254
Ordered Locus Names:Dd586_0044
OrganismDickeya dadantii (strain Ech586) [Complete proteome] [HAMAP] EMBL ACZ74942.1
Taxonomic identifier590409 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Dickeya ›

Protein attributes

Sequence length304 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP-Rule MF_00254 SAAS SAAS002310

Subunit structure

Tetramer of two alpha and two beta subunits By similarity. HAMAP-Rule MF_00254 SAAS SAAS002310

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00254 SAAS SAAS002310.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00254

Sequences

Sequence LengthMass (Da)Tools
D2C0J9 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: A62924B6BBA6C181

FASTA30434,843
        10         20         30         40         50         60 
MQKFDTKTFQ GLILTLQDYW SRQGCTIVQP LDMEVGAGTS HPMTCLRALG PEPIAAAYVQ 

        70         80         90        100        110        120 
PSRRPTDGRY GENPNRLQHY YQFQVIIKPS PDNIQELYLG SLKELGMDPT IHDIRFVEDN 

       130        140        150        160        170        180 
WENPTLGAWG LGWEVWLNGM EVTQFTYFQQ VGGLECKPVT GEITYGLERL AMYIQGVDSV 

       190        200        210        220        230        240 
YDLVWSDGPL GKTTYGDVFH QNEVEQSTYN FEYADVDFLF TCFEQYEKEA QQLLALEKPL 

       250        260        270        280        290        300 
PLPAYERILK AAHSFNLLDA RKAISVTERQ RYILRIRTLT KAVAEAYYAS REALGFPMCN 


RKQS

« Hide

References

[1]"Complete sequence of Dickeya dadantii Ech586."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Balakrishnan V., Glasner J., Perna N.T.
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ech586.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001836 Genomic DNA. Translation: ACZ74942.1.
RefSeqYP_003331647.1. NC_013592.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACZ74942; ACZ74942; Dd586_0044.
GeneID8658937.
KEGGddc:Dd586_0044.
PATRIC32066713. VBIDicDad110536_0046.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000264291.
KOK01878.

Enzyme and pathway databases

BioCycDDAD590409:GHDW-44-MONOMER.

Family and domain databases

HAMAPMF_00254. Gly_tRNA_synth_alpha.
InterProIPR006194. Gly-tRNA-synth_heterodimer.
IPR002310. Gly-tRNA_ligase_asu.
[Graphical view]
PfamPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSPR01044. TRNASYNTHGA.
TIGRFAMsTIGR00388. glyQ. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2C0J9_DICD5
AccessionPrimary (citable) accession number: D2C0J9
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info