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D2BS23

- D2BS23_DICD5

UniProt

D2BS23 - D2BS23_DICD5

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Protein
Submitted name: Nickel-dependent hydrogenase large subunit
Gene
Dd586_2730
Organism
Dickeya dadantii (strain Ech586)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ferredoxin hydrogenase activity Source: InterPro
  2. nickel cation binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

Metal-bindingUniRule annotation, NickelUniRule annotation

Enzyme and pathway databases

BioCyciDDAD590409:GHDW-2782-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Nickel-dependent hydrogenase large subunitImported
Gene namesi
Ordered Locus Names:Dd586_2730Imported
OrganismiDickeya dadantii (strain Ech586)Imported
Taxonomic identifieri590409 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya
ProteomesiUP000001446: Chromosome

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000278799.
KOiK06281.
OrthoDBiEOG6M9DSB.

Family and domain databases

Gene3Di1.10.645.10. 1 hit.
InterProiIPR001501. Ni-dep_hyd_lsu.
IPR018194. Ni-dep_hyd_lsu_Ni_BS.
IPR029014. NiFe_Hase-like.
[Graphical view]
PfamiPF00374. NiFeSe_Hases. 1 hit.
[Graphical view]
SUPFAMiSSF56762. SSF56762. 1 hit.
PROSITEiPS00507. NI_HGENASE_L_1. 1 hit.
PS00508. NI_HGENASE_L_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D2BS23-1 [UniParc]FASTAAdd to Basket

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MSQRITIDPI TRIEGHLRID CEIENGKVTK AWSSGTMWRG MEEIVKGRDP    50
RDAWMIVQRI CGVCTTVHAI ASVRAVENGL GLNVPVNAQY IRNLILAAHS 100
IHDHIVHFYQ LSALDWVDVT SALKADPQKA ATLLNGLSTW PLNTAAEFTK 150
VQQKLKDLVA SGQLGIFANG YWGHPAMSLP PEVNLIAVAH YLQALECQRD 200
ANRIVAILGG KSPHIQNLAV GGVANPINLD APSVLNLERL MYVKSFIDRL 250
GDFIEQVYKV DCAVIAAHYP QWLSLGRGAD HYLSVPELPT DNKNGSFLLA 300
GGYIENSDLS TYRPITSHSD KFLIEGIRES GKHAWYQDDQ PLAPWEGLTR 350
PKYTGWHEDG KYSWVKSPTF YGKTVEVGPL AWLLCGLAAK HKDTLTHFSQ 400
VKAAYQTLSG HQLEEKHLHS TLGRVIGRTV HCCVLKDTLA QQWQALVDNI 450
GKGDHQTFIK PDFSPDTEFH GVGFGEMPRG MLSHWVVFKN GKITNYQAVV 500
PSTWTSCPRN GEDKPGPYEQ SLVGTPVADP HKPLEVVRTI HSFDPCMSCA 550
VHVVDTVNGN EVTRVKVL 568
Length:568
Mass (Da):62,943
Last modified:February 9, 2010 - v1
Checksum:i0DACDF21364237C5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001836 Genomic DNA. Translation: ACZ77570.1.
RefSeqiYP_003334275.1. NC_013592.1.

Genome annotation databases

EnsemblBacteriaiACZ77570; ACZ77570; Dd586_2730.
GeneIDi8661675.
KEGGiddc:Dd586_2730.
PATRICi32072192. VBIDicDad110536_2740.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001836 Genomic DNA. Translation: ACZ77570.1 .
RefSeqi YP_003334275.1. NC_013592.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACZ77570 ; ACZ77570 ; Dd586_2730 .
GeneIDi 8661675.
KEGGi ddc:Dd586_2730.
PATRICi 32072192. VBIDicDad110536_2740.

Phylogenomic databases

HOGENOMi HOG000278799.
KOi K06281.
OrthoDBi EOG6M9DSB.

Enzyme and pathway databases

BioCyci DDAD590409:GHDW-2782-MONOMER.

Family and domain databases

Gene3Di 1.10.645.10. 1 hit.
InterProi IPR001501. Ni-dep_hyd_lsu.
IPR018194. Ni-dep_hyd_lsu_Ni_BS.
IPR029014. NiFe_Hase-like.
[Graphical view ]
Pfami PF00374. NiFeSe_Hases. 1 hit.
[Graphical view ]
SUPFAMi SSF56762. SSF56762. 1 hit.
PROSITEi PS00507. NI_HGENASE_L_1. 1 hit.
PS00508. NI_HGENASE_L_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ech586Imported.

Entry informationi

Entry nameiD2BS23_DICD5
AccessioniPrimary (citable) accession number: D2BS23
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: June 11, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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