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D2BS23 (D2BS23_DICD5) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Dd586_2730 EMBL ACZ77570.1
OrganismDickeya dadantii (strain Ech586) [Complete proteome] [HAMAP] EMBL ACZ77570.1
Taxonomic identifier590409 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya

Protein attributes

Sequence length568 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
D2BS23 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: 0DACDF21364237C5

FASTA56862,943
        10         20         30         40         50         60 
MSQRITIDPI TRIEGHLRID CEIENGKVTK AWSSGTMWRG MEEIVKGRDP RDAWMIVQRI 

        70         80         90        100        110        120 
CGVCTTVHAI ASVRAVENGL GLNVPVNAQY IRNLILAAHS IHDHIVHFYQ LSALDWVDVT 

       130        140        150        160        170        180 
SALKADPQKA ATLLNGLSTW PLNTAAEFTK VQQKLKDLVA SGQLGIFANG YWGHPAMSLP 

       190        200        210        220        230        240 
PEVNLIAVAH YLQALECQRD ANRIVAILGG KSPHIQNLAV GGVANPINLD APSVLNLERL 

       250        260        270        280        290        300 
MYVKSFIDRL GDFIEQVYKV DCAVIAAHYP QWLSLGRGAD HYLSVPELPT DNKNGSFLLA 

       310        320        330        340        350        360 
GGYIENSDLS TYRPITSHSD KFLIEGIRES GKHAWYQDDQ PLAPWEGLTR PKYTGWHEDG 

       370        380        390        400        410        420 
KYSWVKSPTF YGKTVEVGPL AWLLCGLAAK HKDTLTHFSQ VKAAYQTLSG HQLEEKHLHS 

       430        440        450        460        470        480 
TLGRVIGRTV HCCVLKDTLA QQWQALVDNI GKGDHQTFIK PDFSPDTEFH GVGFGEMPRG 

       490        500        510        520        530        540 
MLSHWVVFKN GKITNYQAVV PSTWTSCPRN GEDKPGPYEQ SLVGTPVADP HKPLEVVRTI 

       550        560 
HSFDPCMSCA VHVVDTVNGN EVTRVKVL 

« Hide

References

[1]"Complete sequence of Dickeya dadantii Ech586."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N. expand/collapse author list , Balakrishnan V., Glasner J., Perna N.T.
Submitted (DEC-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Ech586 EMBL ACZ77570.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001836 Genomic DNA. Translation: ACZ77570.1.
RefSeqYP_003334275.1. NC_013592.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACZ77570; ACZ77570; Dd586_2730.
GeneID8661675.
KEGGddc:Dd586_2730.
PATRIC32072192. VBIDicDad110536_2740.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000278799.
KOK06281.
OrthoDBEOG6M9DSB.

Enzyme and pathway databases

BioCycDDAD590409:GHDW-2782-MONOMER.

Family and domain databases

InterProIPR001501. Ni-dep_hyd_lsu.
IPR018194. Ni-dep_hyd_lsu_Ni_BS.
[Graphical view]
PfamPF00374. NiFeSe_Hases. 1 hit.
[Graphical view]
PROSITEPS00507. NI_HGENASE_L_1. 1 hit.
PS00508. NI_HGENASE_L_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2BS23_DICD5
AccessionPrimary (citable) accession number: D2BS23
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: November 13, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)