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D2BS23

- D2BS23_DICD5

UniProt

D2BS23 - D2BS23_DICD5

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Protein
Submitted name:

Nickel-dependent hydrogenase large subunit

Gene

Dd586_2730

Organism
Dickeya dadantii (strain Ech586)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. ferredoxin hydrogenase activity Source: InterPro
  2. nickel cation binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

Metal-bindingUniRule annotation, NickelUniRule annotation

Enzyme and pathway databases

BioCyciDDAD590409:GHDW-2782-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Nickel-dependent hydrogenase large subunitImported
Gene namesi
Ordered Locus Names:Dd586_2730Imported
OrganismiDickeya dadantii (strain Ech586)Imported
Taxonomic identifieri590409 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya
ProteomesiUP000001446: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000278799.
KOiK06281.
OrthoDBiEOG6M9DSB.

Family and domain databases

Gene3Di1.10.645.10. 1 hit.
InterProiIPR001501. Ni-dep_hyd_lsu.
IPR018194. Ni-dep_hyd_lsu_Ni_BS.
IPR029014. NiFe_Hase-like.
[Graphical view]
PfamiPF00374. NiFeSe_Hases. 1 hit.
[Graphical view]
SUPFAMiSSF56762. SSF56762. 1 hit.
PROSITEiPS00507. NI_HGENASE_L_1. 1 hit.
PS00508. NI_HGENASE_L_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D2BS23-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSQRITIDPI TRIEGHLRID CEIENGKVTK AWSSGTMWRG MEEIVKGRDP
60 70 80 90 100
RDAWMIVQRI CGVCTTVHAI ASVRAVENGL GLNVPVNAQY IRNLILAAHS
110 120 130 140 150
IHDHIVHFYQ LSALDWVDVT SALKADPQKA ATLLNGLSTW PLNTAAEFTK
160 170 180 190 200
VQQKLKDLVA SGQLGIFANG YWGHPAMSLP PEVNLIAVAH YLQALECQRD
210 220 230 240 250
ANRIVAILGG KSPHIQNLAV GGVANPINLD APSVLNLERL MYVKSFIDRL
260 270 280 290 300
GDFIEQVYKV DCAVIAAHYP QWLSLGRGAD HYLSVPELPT DNKNGSFLLA
310 320 330 340 350
GGYIENSDLS TYRPITSHSD KFLIEGIRES GKHAWYQDDQ PLAPWEGLTR
360 370 380 390 400
PKYTGWHEDG KYSWVKSPTF YGKTVEVGPL AWLLCGLAAK HKDTLTHFSQ
410 420 430 440 450
VKAAYQTLSG HQLEEKHLHS TLGRVIGRTV HCCVLKDTLA QQWQALVDNI
460 470 480 490 500
GKGDHQTFIK PDFSPDTEFH GVGFGEMPRG MLSHWVVFKN GKITNYQAVV
510 520 530 540 550
PSTWTSCPRN GEDKPGPYEQ SLVGTPVADP HKPLEVVRTI HSFDPCMSCA
560
VHVVDTVNGN EVTRVKVL
Length:568
Mass (Da):62,943
Last modified:February 9, 2010 - v1
Checksum:i0DACDF21364237C5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001836 Genomic DNA. Translation: ACZ77570.1.
RefSeqiYP_003334275.1. NC_013592.1.

Genome annotation databases

EnsemblBacteriaiACZ77570; ACZ77570; Dd586_2730.
GeneIDi8661675.
KEGGiddc:Dd586_2730.
PATRICi32072192. VBIDicDad110536_2740.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001836 Genomic DNA. Translation: ACZ77570.1 .
RefSeqi YP_003334275.1. NC_013592.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACZ77570 ; ACZ77570 ; Dd586_2730 .
GeneIDi 8661675.
KEGGi ddc:Dd586_2730.
PATRICi 32072192. VBIDicDad110536_2740.

Phylogenomic databases

HOGENOMi HOG000278799.
KOi K06281.
OrthoDBi EOG6M9DSB.

Enzyme and pathway databases

BioCyci DDAD590409:GHDW-2782-MONOMER.

Family and domain databases

Gene3Di 1.10.645.10. 1 hit.
InterProi IPR001501. Ni-dep_hyd_lsu.
IPR018194. Ni-dep_hyd_lsu_Ni_BS.
IPR029014. NiFe_Hase-like.
[Graphical view ]
Pfami PF00374. NiFeSe_Hases. 1 hit.
[Graphical view ]
SUPFAMi SSF56762. SSF56762. 1 hit.
PROSITEi PS00507. NI_HGENASE_L_1. 1 hit.
PS00508. NI_HGENASE_L_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ech586Imported.

Entry informationi

Entry nameiD2BS23_DICD5
AccessioniPrimary (citable) accession number: D2BS23
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: October 1, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3