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D2BS23

- D2BS23_DICD5

UniProt

D2BS23 - D2BS23_DICD5

Protein
Submitted name:

Nickel-dependent hydrogenase large subunit

Gene

Dd586_2730

Organism
Dickeya dadantii (strain Ech586)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (09 Feb 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ferredoxin hydrogenase activity Source: InterPro
    2. nickel cation binding Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    Metal-bindingUniRule annotation, NickelUniRule annotation

    Enzyme and pathway databases

    BioCyciDDAD590409:GHDW-2782-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Nickel-dependent hydrogenase large subunitImported
    Gene namesi
    Ordered Locus Names:Dd586_2730Imported
    OrganismiDickeya dadantii (strain Ech586)Imported
    Taxonomic identifieri590409 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeDickeya
    ProteomesiUP000001446: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000278799.
    KOiK06281.
    OrthoDBiEOG6M9DSB.

    Family and domain databases

    Gene3Di1.10.645.10. 1 hit.
    InterProiIPR001501. Ni-dep_hyd_lsu.
    IPR018194. Ni-dep_hyd_lsu_Ni_BS.
    IPR029014. NiFe_Hase-like.
    [Graphical view]
    PfamiPF00374. NiFeSe_Hases. 1 hit.
    [Graphical view]
    SUPFAMiSSF56762. SSF56762. 1 hit.
    PROSITEiPS00507. NI_HGENASE_L_1. 1 hit.
    PS00508. NI_HGENASE_L_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D2BS23-1 [UniParc]FASTAAdd to Basket

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    MSQRITIDPI TRIEGHLRID CEIENGKVTK AWSSGTMWRG MEEIVKGRDP    50
    RDAWMIVQRI CGVCTTVHAI ASVRAVENGL GLNVPVNAQY IRNLILAAHS 100
    IHDHIVHFYQ LSALDWVDVT SALKADPQKA ATLLNGLSTW PLNTAAEFTK 150
    VQQKLKDLVA SGQLGIFANG YWGHPAMSLP PEVNLIAVAH YLQALECQRD 200
    ANRIVAILGG KSPHIQNLAV GGVANPINLD APSVLNLERL MYVKSFIDRL 250
    GDFIEQVYKV DCAVIAAHYP QWLSLGRGAD HYLSVPELPT DNKNGSFLLA 300
    GGYIENSDLS TYRPITSHSD KFLIEGIRES GKHAWYQDDQ PLAPWEGLTR 350
    PKYTGWHEDG KYSWVKSPTF YGKTVEVGPL AWLLCGLAAK HKDTLTHFSQ 400
    VKAAYQTLSG HQLEEKHLHS TLGRVIGRTV HCCVLKDTLA QQWQALVDNI 450
    GKGDHQTFIK PDFSPDTEFH GVGFGEMPRG MLSHWVVFKN GKITNYQAVV 500
    PSTWTSCPRN GEDKPGPYEQ SLVGTPVADP HKPLEVVRTI HSFDPCMSCA 550
    VHVVDTVNGN EVTRVKVL 568
    Length:568
    Mass (Da):62,943
    Last modified:February 9, 2010 - v1
    Checksum:i0DACDF21364237C5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001836 Genomic DNA. Translation: ACZ77570.1.
    RefSeqiYP_003334275.1. NC_013592.1.

    Genome annotation databases

    EnsemblBacteriaiACZ77570; ACZ77570; Dd586_2730.
    GeneIDi8661675.
    KEGGiddc:Dd586_2730.
    PATRICi32072192. VBIDicDad110536_2740.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001836 Genomic DNA. Translation: ACZ77570.1 .
    RefSeqi YP_003334275.1. NC_013592.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACZ77570 ; ACZ77570 ; Dd586_2730 .
    GeneIDi 8661675.
    KEGGi ddc:Dd586_2730.
    PATRICi 32072192. VBIDicDad110536_2740.

    Phylogenomic databases

    HOGENOMi HOG000278799.
    KOi K06281.
    OrthoDBi EOG6M9DSB.

    Enzyme and pathway databases

    BioCyci DDAD590409:GHDW-2782-MONOMER.

    Family and domain databases

    Gene3Di 1.10.645.10. 1 hit.
    InterProi IPR001501. Ni-dep_hyd_lsu.
    IPR018194. Ni-dep_hyd_lsu_Ni_BS.
    IPR029014. NiFe_Hase-like.
    [Graphical view ]
    Pfami PF00374. NiFeSe_Hases. 1 hit.
    [Graphical view ]
    SUPFAMi SSF56762. SSF56762. 1 hit.
    PROSITEi PS00507. NI_HGENASE_L_1. 1 hit.
    PS00508. NI_HGENASE_L_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Ech586Imported.

    Entry informationi

    Entry nameiD2BS23_DICD5
    AccessioniPrimary (citable) accession number: D2BS23
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 9, 2010
    Last sequence update: February 9, 2010
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3