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D2BR59

- D2BR59_LACLK

UniProt

D2BR59 - D2BR59_LACLK

Protein

Glutamate decarboxylase

Gene

gadB

Organism
Lactococcus lactis subsp. lactis (strain KF147)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (09 Feb 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: UniProtKB-EC
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciLLAC684738:GI3F-1397-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Name:gadBImported
    Ordered Locus Names:LLKF_1356Imported
    OrganismiLactococcus lactis subsp. lactis (strain KF147)Imported
    Taxonomic identifieri684738 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeLactococcus
    ProteomesiUP000001886: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiDEYALAH.
    OrthoDBiEOG6TFCPW.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D2BR59-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLYGKENRDE AEFLEPIFGS ESEQVDLPKY KLAQKSIEPR VAYQLVQDEM    50
    LDEGNARLNL ATFCQTYMEP EALKLMSQTL EKNAIDKSEY PRTTEIENRC 100
    VNMIADLWNA CEKEKFMGTS TIGSSEACML GGMAMKFSWR KRAEKLGLDI 150
    NAKKPNLVIS SGYQVCWEKF CVYWDIEMRE VPMDKEHMSI NLDKVMDYVD 200
    EYTIGVVGIM GITYTGRYDD IKALDNLIEE YNKQTDYKVY IHVDAASGGL 250
    YAPFVEPELE WDFRLKNVIS INTSGHKYGL VYPGVGWVLW RDKKYLPEEL 300
    IFKVSYLGGE LPTMAINFSH SASQLIGQYY NFVRYGFDGY KAIHERTHKV 350
    AMFLAKEIEK TGMFEIMNDG SQLPIVCYKL KENSNRGWNL YDLADRLLMK 400
    GWQVPAYPLP KNLENEIIQR LVIRADFGMN MAFNYVQDMQ EAIEALNKAH 450
    ILYHEEPENK TYGFTH 466
    Length:466
    Mass (Da):53,942
    Last modified:February 9, 2010 - v1
    Checksum:i535E2CDE274354C4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001834 Genomic DNA. Translation: ADA65034.1.
    RefSeqiWP_012897891.1. NC_013656.1.
    YP_003353790.1. NC_013656.1.

    Genome annotation databases

    EnsemblBacteriaiADA65034; ADA65034; LLKF_1356.
    GeneIDi8678778.
    KEGGillk:LLKF_1356.
    PATRICi32251206. VBILacLac141273_1375.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001834 Genomic DNA. Translation: ADA65034.1 .
    RefSeqi WP_012897891.1. NC_013656.1.
    YP_003353790.1. NC_013656.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADA65034 ; ADA65034 ; LLKF_1356 .
    GeneIDi 8678778.
    KEGGi llk:LLKF_1356.
    PATRICi 32251206. VBILacLac141273_1375.

    Phylogenomic databases

    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi DEYALAH.
    OrthoDBi EOG6TFCPW.

    Enzyme and pathway databases

    BioCyci LLAC684738:GI3F-1397-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome-scale genotype-phenotype matching of two Lactococcus lactis isolates from plants identifies mechanisms of adaptation to the plant niche."
      Siezen R.J., Starrenburg M.J., Boekhorst J., Renckens B., Molenaar D., van Hylckama Vlieg J.E.
      Appl. Environ. Microbiol. 74:424-436(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: KF147Imported.

    Entry informationi

    Entry nameiD2BR59_LACLK
    AccessioniPrimary (citable) accession number: D2BR59
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 9, 2010
    Last sequence update: February 9, 2010
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3