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D2BR59 (D2BR59_LACLK) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL ADA65034.1
Gene names
Name:gadB EMBL ADA65034.1
Ordered Locus Names:LLKF_1356 EMBL ADA65034.1
OrganismLactococcus lactis subsp. lactis (strain KF147) [Complete proteome] [HAMAP] EMBL ADA65034.1
Taxonomic identifier684738 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeLactococcus

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
D2BR59 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: 535E2CDE274354C4

FASTA46653,942
        10         20         30         40         50         60 
MLYGKENRDE AEFLEPIFGS ESEQVDLPKY KLAQKSIEPR VAYQLVQDEM LDEGNARLNL 

        70         80         90        100        110        120 
ATFCQTYMEP EALKLMSQTL EKNAIDKSEY PRTTEIENRC VNMIADLWNA CEKEKFMGTS 

       130        140        150        160        170        180 
TIGSSEACML GGMAMKFSWR KRAEKLGLDI NAKKPNLVIS SGYQVCWEKF CVYWDIEMRE 

       190        200        210        220        230        240 
VPMDKEHMSI NLDKVMDYVD EYTIGVVGIM GITYTGRYDD IKALDNLIEE YNKQTDYKVY 

       250        260        270        280        290        300 
IHVDAASGGL YAPFVEPELE WDFRLKNVIS INTSGHKYGL VYPGVGWVLW RDKKYLPEEL 

       310        320        330        340        350        360 
IFKVSYLGGE LPTMAINFSH SASQLIGQYY NFVRYGFDGY KAIHERTHKV AMFLAKEIEK 

       370        380        390        400        410        420 
TGMFEIMNDG SQLPIVCYKL KENSNRGWNL YDLADRLLMK GWQVPAYPLP KNLENEIIQR 

       430        440        450        460 
LVIRADFGMN MAFNYVQDMQ EAIEALNKAH ILYHEEPENK TYGFTH 

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References

[1]"Genome-scale genotype-phenotype matching of two Lactococcus lactis isolates from plants identifies mechanisms of adaptation to the plant niche."
Siezen R.J., Starrenburg M.J., Boekhorst J., Renckens B., Molenaar D., van Hylckama Vlieg J.E.
Appl. Environ. Microbiol. 74:424-436(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KF147 EMBL ADA65034.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001834 Genomic DNA. Translation: ADA65034.1.
RefSeqYP_003353790.1. NC_013656.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADA65034; ADA65034; LLKF_1356.
GeneID8678778.
KEGGllk:LLKF_1356.
PATRIC32251206. VBILacLac141273_1375.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMADEYALAH.
OrthoDBEOG6TFCPW.

Enzyme and pathway databases

BioCycLLAC684738:GI3F-1397-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD2BR59_LACLK
AccessionPrimary (citable) accession number: D2BR59
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: May 14, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)