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D2BM26 (D2BM26_LACLK) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length998 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. SAAS SAAS006101

Ontologies

Sequences

Sequence LengthMass (Da)Tools
D2BM26 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: 220BFF8A1FBC50EE

FASTA998115,349
        10         20         30         40         50         60 
MAMMTMIDVL ERKDWENPVV SNWNRLPMHT PMDFLEKQSL NGLWNFDHFS RISDVPKNWL 

        70         80         90        100        110        120 
ELTESKTEII VPSNWQIEFK DKSDVPIYTN VTYPIPIQPP YVPEANPVGA YSRYFDITKE 

       130        140        150        160        170        180 
WLESGHVHLT FEGVGSAFHF WLNGEYGGYS EDSRLSAEFD ISNLAKEGQN CLKVLVFRWS 

       190        200        210        220        230        240 
KGTYFEDQDM WRMSGIFRSV NLQWLPDNYL LDFSIKTDLD EDLDFANVKL QAYAKNMDDA 

       250        260        270        280        290        300 
CLEFKLYDDE QLIGECHGFD AEIGVVNPKL WSDEIPYLYR LELTLMDRSG AVFHKETKKI 

       310        320        330        340        350        360 
GIRKIAIEKG QLKINGKALL VRGVNKHEFT PEHGYVVSEE VMIKDIKLMK EHNFNAVRCS 

       370        380        390        400        410        420 
HYPNDSRWYE LCDEYGLYVM DEANIETHGM TPMNRLTNDP TYLPLMSERV TRMVMRDRNH 

       430        440        450        460        470        480 
PSIIIWSLGN ESGYGSNHQA LYDWCKSFDS SRPVHYEGGD DASRGATDAT DIICPMYARV 

       490        500        510        520        530        540 
DSPSINAPYS LKTWMGVAGE NRPLILCEYA HDMGNSLGGF GKYWQAFREI DRLQGGFIWD 

       550        560        570        580        590        600 
WVDQGLLKDG NYAYGGDFGD KPNDRQFSLN GLVFPNRQAK PALREAKYWQ QYYQFELEKT 

       610        620        630        640        650        660 
PLGQVFAFTV TNEYLFRSTD NEKLCYQLTN GLEVLWENEL ILNMPAGGSM RIDLSELPID 

       670        680        690        700        710        720 
GTDNLFLNIQ VKTIEKCNLL ESDFEVAHQQ FVLQEKINFT DRIDSNEEIT LLEDEELLTV 

       730        740        750        760        770        780 
RSAKQKFIFN KSNGNLSRWL DEKGNEKLLH ELSEQFTRAP LDNDIGVSEV EHIDPNAWLE 

       790        800        810        820        830        840 
RWKAVGFYEL KTLLKNMIIQ ATENEVIISV QTDYEAKGKI AFSTIREYHI FRNGELLLKV 

       850        860        870        880        890        900 
DFKRNIEFPE PARIGLSLQL AEKAENVTYF GLGPDENYPD RRGASLFGQW NLRITDMTTP 

       910        920        930        940        950        960 
YIFPSENGLR METRELNYGR LKVRAMGQSF AFNLSPYSQN QLAKKGHWHL LEEEAGTWLN 

       970        980        990 
IDGFHMGVGG DDSWSPSVAQ EYLLTKGNYH YEVSFKLT 

« Hide

References

[1]"Genome-scale genotype-phenotype matching of two Lactococcus lactis isolates from plants identifies mechanisms of adaptation to the plant niche."
Siezen R.J., Starrenburg M.J., Boekhorst J., Renckens B., Molenaar D., van Hylckama Vlieg J.E.
Appl. Environ. Microbiol. 74:424-436(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KF147 EMBL ADA65738.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001834 Genomic DNA. Translation: ADA65738.1.
RefSeqYP_003354563.1. NC_013656.1.

3D structure databases

ProteinModelPortalD2BM26.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADA65738; ADA65738; LLKF_2164.
GeneID8679608.
KEGGllk:LLKF_2164.
PATRIC32252848. VBILacLac141273_2177.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000252443.
KOK01190.
OMAHRCAWDQ.
OrthoDBEOG6XWV0T.

Enzyme and pathway databases

BioCycLLAC684738:GI3F-2227-MONOMER.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
2.60.40.320. 2 hits.
2.70.98.10. 1 hit.
3.20.20.80. 1 hit.
InterProIPR004199. B-gal_small/dom_5.
IPR011013. Gal_mutarotase_SF_dom.
IPR008979. Galactose-bd-like.
IPR014718. Glyco_hydro-type_carb-bd_sub.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR023232. Glyco_hydro_2_AS.
IPR023230. Glyco_hydro_2_CS.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF02929. Bgal_small_N. 1 hit.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSPR00132. GLHYDRLASE2.
SMARTSM01038. Bgal_small_N. 1 hit.
[Graphical view]
SUPFAMSSF49303. SSF49303. 2 hits.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.
SSF74650. SSF74650. 1 hit.
PROSITEPS00719. GLYCOSYL_HYDROL_F2_1. 1 hit.
PS00608. GLYCOSYL_HYDROL_F2_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameD2BM26_LACLK
AccessionPrimary (citable) accession number: D2BM26
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: November 13, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)