D2BD79 (D2BD79_STRRD) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 27.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Phosphoenolpyruvate carboxylase HAMAP-Rule MF_00595 Short name=PEPC HAMAP-Rule MF_00595 Short name=PEPCase HAMAP-Rule MF_00595 EC=4.1.1.31 HAMAP-Rule MF_00595 | ||||
| Gene names |
| ||||
| Organism | Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) [Complete proteome] [HAMAP] EMBL ACZ84320.1 | ||||
| Taxonomic identifier | 479432 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Streptosporangineae › Streptosporangiaceae › Streptosporangium › ![]() |
Protein attributes
| Sequence length | 879 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. HAMAP-Rule MF_00595 |
| Catalytic activity | Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. SAAS SAAS018129 HAMAP-Rule MF_00595 |
| Cofactor | Magnesium By similarity. SAAS SAAS018129 HAMAP-Rule MF_00595 |
| Subunit structure | Homotetramer By similarity. HAMAP-Rule MF_00595 |
| Sequence similarities | Belongs to the PEPCase type 1 family. HAMAP-Rule MF_00595 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Carbon dioxide fixation SAAS SAAS018129 HAMAP-Rule MF_00595 |
| Ligand | Magnesium SAAS SAAS018129 HAMAP-Rule MF_00595 Pyruvate EMBL ACZ84320.1 |
| Molecular function | Lyase SAAS SAAS018129 HAMAP-Rule MF_00595 EMBL ACZ84320.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | carbon fixation Inferred from electronic annotation. Source: HAMAP oxaloacetate metabolic processInferred from electronic annotation. Source: HAMAP tricarboxylic acid cycleInferred from electronic annotation. Source: InterPro |
| Molecular_function | magnesium ion binding Inferred from electronic annotation. Source: HAMAP phosphoenolpyruvate carboxylase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Active site | 149 | 1 | By similarity HAMAP-Rule MF_00595 | ||||||
| Active site | 540 | 1 | By similarity HAMAP-Rule MF_00595 | ||||||
Sequences
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References
| [1] | "Complete genome sequence of Streptosporangium roseum type strain (NI 9100T)." Nolan M., Sikorski J., Jando M., Lucas S., Lapidus A., Glavina Del Rio T., Chen F., Tice H., Pitluck S., Cheng J.F., Chertkov O., Sims D., Meincke L., Brettin T., Han C., Detter J.C., Bruce D., Goodwin L. Klenk H.P.Stand. Genomic Sci. 2:29-37(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001814 Genomic DNA. Translation: ACZ84320.1. |
| RefSeq | YP_003337063.1. NC_013595.1. |
3D structure databases | |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | ACZ84320; ACZ84320; Sros_1323. |
| GeneID | 8664598. |
| KEGG | sro:Sros_1323. |
| PATRIC | 32464591. VBIStrRos112010_1297. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HOG000238647. |
| KO | K01595. |
| OMA | AIPWVFG. |
Family and domain databases | |
| HAMAP | MF_00595. PEPcase_type1. |
| InterPro | IPR021135. PEP_COase. IPR018129. PEP_COase_AS. IPR022805. PEP_COase_bac/pln-type. IPR015813. Pyrv/PenolPyrv_Kinase. [Graphical view] |
| Pfam | PF00311. PEPcase. 2 hits. [Graphical view] |
| PRINTS | PR00150. PEPCARBXLASE. |
| SUPFAM | SSF51621. Pyrv/PenolPyrv_Kinase_cat. 1 hit. |
| PROSITE | PS00781. PEPCASE_1. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | D2BD79_STRRD | ||||||||
| Accession | Primary (citable) accession number: D2BD79 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
