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D2B3Y4

- D2B3Y4_STRRD

UniProt

D2B3Y4 - D2B3Y4_STRRD

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Sros_6710

Organism
Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSROS479432:GI0V-6755-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Sros_6710Imported
OrganismiStreptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)Imported
Taxonomic identifieri479432 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeStreptosporangiaceaeStreptosporangium
ProteomesiUP000002029: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D2B3Y4-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MRLPIAPPLA PMLAKAVRSL PPQDGTLFYE PKWDGFRCVV FRDGDEVYLG
60 70 80 90 100
SRNERPFTRY FPELVEAVRA ELPDRVVVDG EIVVRDGQTL DFEALQQRIH
110 120 130 140 150
PAASRVRLLA GQTPASFVAF DLLALGEESL LDVPFAARRT RLESIFGGAG
160 170 180 190 200
HAVRLTPITT SEERAAEWFA AFEGAGLDGI VVKPGGLPYQ PDKRVMSKVK
210 220 230 240 250
HERTADVVVA GYREHKSGPV VGSLLLGLHD AEGVLHHVGV AASFTMKRRA
260 270 280 290 300
ELVEELAPYV SRDGDHPWSA ASLPGAISKW SATKDLSFVP LRSELVVEVA
310 320 330 340
YDHMEGRRFR HTAQFRRWRP DRTPESCTYE QLERPVSYDL DDILTG
Length:346
Mass (Da):38,493
Last modified:February 9, 2010 - v1
Checksum:i048A87EDAC0AC4E1
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001814 Genomic DNA. Translation: ACZ89419.1.
RefSeqiWP_012893150.1. NC_013595.1.
YP_003342162.1. NC_013595.1.

Genome annotation databases

EnsemblBacteriaiACZ89419; ACZ89419; Sros_6710.
GeneIDi8670019.
KEGGisro:Sros_6710.
PATRICi32475274. VBIStrRos112010_6608.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001814 Genomic DNA. Translation: ACZ89419.1 .
RefSeqi WP_012893150.1. NC_013595.1.
YP_003342162.1. NC_013595.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACZ89419 ; ACZ89419 ; Sros_6710 .
GeneIDi 8670019.
KEGGi sro:Sros_6710.
PATRICi 32475274. VBIStrRos112010_6608.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci SROS479432:GI0V-6755-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100Imported.

Entry informationi

Entry nameiD2B3Y4_STRRD
AccessioniPrimary (citable) accession number: D2B3Y4
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: October 29, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3