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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Sros_6710

Organism
Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSROS479432:GI0V-6755-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Sros_6710Imported
OrganismiStreptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)Imported
Taxonomic identifieri479432 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptosporangialesStreptosporangiaceaeStreptosporangium
ProteomesiUP000002029 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi479432.Sros_6710.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

D2B3Y4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRLPIAPPLA PMLAKAVRSL PPQDGTLFYE PKWDGFRCVV FRDGDEVYLG
60 70 80 90 100
SRNERPFTRY FPELVEAVRA ELPDRVVVDG EIVVRDGQTL DFEALQQRIH
110 120 130 140 150
PAASRVRLLA GQTPASFVAF DLLALGEESL LDVPFAARRT RLESIFGGAG
160 170 180 190 200
HAVRLTPITT SEERAAEWFA AFEGAGLDGI VVKPGGLPYQ PDKRVMSKVK
210 220 230 240 250
HERTADVVVA GYREHKSGPV VGSLLLGLHD AEGVLHHVGV AASFTMKRRA
260 270 280 290 300
ELVEELAPYV SRDGDHPWSA ASLPGAISKW SATKDLSFVP LRSELVVEVA
310 320 330 340
YDHMEGRRFR HTAQFRRWRP DRTPESCTYE QLERPVSYDL DDILTG
Length:346
Mass (Da):38,493
Last modified:February 9, 2010 - v1
Checksum:i048A87EDAC0AC4E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001814 Genomic DNA. Translation: ACZ89419.1.
RefSeqiWP_012893150.1. NC_013595.1.
YP_003342162.1. NC_013595.1.

Genome annotation databases

EnsemblBacteriaiACZ89419; ACZ89419; Sros_6710.
KEGGisro:Sros_6710.
PATRICi32475274. VBIStrRos112010_6608.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001814 Genomic DNA. Translation: ACZ89419.1.
RefSeqiWP_012893150.1. NC_013595.1.
YP_003342162.1. NC_013595.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi479432.Sros_6710.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACZ89419; ACZ89419; Sros_6710.
KEGGisro:Sros_6710.
PATRICi32475274. VBIStrRos112010_6608.

Phylogenomic databases

HOGENOMiHOG000222508.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Enzyme and pathway databases

BioCyciSROS479432:GI0V-6755-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100Imported.

Entry informationi

Entry nameiD2B3Y4_STRRD
AccessioniPrimary (citable) accession number: D2B3Y4
Entry historyi
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: June 24, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.