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D2B3Y4

- D2B3Y4_STRRD

UniProt

D2B3Y4 - D2B3Y4_STRRD

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Sros_6710

Organism
Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (09 Feb 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSROS479432:GI0V-6755-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Sros_6710Imported
    OrganismiStreptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100)Imported
    Taxonomic identifieri479432 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptosporangineaeStreptosporangiaceaeStreptosporangium
    ProteomesiUP000002029: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiHERTADC.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    D2B3Y4-1 [UniParc]FASTAAdd to Basket

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    MRLPIAPPLA PMLAKAVRSL PPQDGTLFYE PKWDGFRCVV FRDGDEVYLG    50
    SRNERPFTRY FPELVEAVRA ELPDRVVVDG EIVVRDGQTL DFEALQQRIH 100
    PAASRVRLLA GQTPASFVAF DLLALGEESL LDVPFAARRT RLESIFGGAG 150
    HAVRLTPITT SEERAAEWFA AFEGAGLDGI VVKPGGLPYQ PDKRVMSKVK 200
    HERTADVVVA GYREHKSGPV VGSLLLGLHD AEGVLHHVGV AASFTMKRRA 250
    ELVEELAPYV SRDGDHPWSA ASLPGAISKW SATKDLSFVP LRSELVVEVA 300
    YDHMEGRRFR HTAQFRRWRP DRTPESCTYE QLERPVSYDL DDILTG 346
    Length:346
    Mass (Da):38,493
    Last modified:February 9, 2010 - v1
    Checksum:i048A87EDAC0AC4E1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001814 Genomic DNA. Translation: ACZ89419.1.
    RefSeqiYP_003342162.1. NC_013595.1.

    Genome annotation databases

    EnsemblBacteriaiACZ89419; ACZ89419; Sros_6710.
    GeneIDi8670019.
    KEGGisro:Sros_6710.
    PATRICi32475274. VBIStrRos112010_6608.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001814 Genomic DNA. Translation: ACZ89419.1 .
    RefSeqi YP_003342162.1. NC_013595.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACZ89419 ; ACZ89419 ; Sros_6710 .
    GeneIDi 8670019.
    KEGGi sro:Sros_6710.
    PATRICi 32475274. VBIStrRos112010_6608.

    Phylogenomic databases

    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi HERTADC.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci SROS479432:GI0V-6755-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100Imported.

    Entry informationi

    Entry nameiD2B3Y4_STRRD
    AccessioniPrimary (citable) accession number: D2B3Y4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 9, 2010
    Last sequence update: February 9, 2010
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3