D2AKB3 (D2AKB3_FRATE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL ADA79432.1

Gene names

Ordered Locus Names:

NE061598_10020

Organism

Francisella tularensis subsp. tularensis (strain NE061598) [Complete proteome] [HAMAP]

Taxonomic identifier

510831 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Thiotrichales › Francisellaceae › Francisella › Francisella tularensis › Francisella tularensis subsp. tularensis

Protein attributes

Sequence length	448 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	D2AKB3 [UniParc]. Last modified February 9, 2010. Version 1. Checksum: 2A48F8FD23CA64D4	FASTA	448	50,815
	10 20 30 40 50 60 MALHGKKDTI DNLDFFEQSL PKFKLPLNSQ DPLEVYQEIK DELMLDGNSK QNLATFCQTE 70 80 90 100 110 120 VDDFIHKLMD DCIDKNMIDK DEYPQTAEIE SRCVNILANL WNSSAENAIG CSTTGSSEAA 130 140 150 160 170 180 MLGGMAMKWR WRDKMKAQGK DYTKPNLVTG PVQVCWHKFA RYWDIELREI PMSNESLIMT 190 200 210 220 230 240 PEAVLERCDE NTIGVVPTLG VTFTGQYEPV EQVCKALDDF ERQTGVDIPV HVDAASGGFL 250 260 270 280 290 300 APFVEPELKW DFRLPRVKSI NSSGHKFGLS PLGVGWVIWA DKKYLPDDLI FNVNYLGGNM 310 320 330 340 350 360 PAFALNFSRL GGQIVAQYYN FVRLGFEGYK KVHQLCYDVA EYIAKELRKM EIFEIIHAGE 370 380 390 400 410 420 GGIPAVSWSL KATKEYSLFD ISEKVRAKGW QIAAYTMPNN REDLVVMRVL VRRGFSYDLA 430 440 QLMIRDLVAV IDSLEGKLKI LKRSSFAH

References

[1]

"Large direct repeats flank genomic rearrangements between a new clinical isolate of Francisella tularensis subsp. tularensis A1 and Schu S4." Nalbantoglu U., Sayood K., Dempsey M.P., Iwen P.C., Francesconi S.C., Barabote R.D., Xie G., Brettin T.S., Hinrichs S.H., Fey P.D. PLoS ONE 5:E9007-E9007(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NE061598.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001633 Genomic DNA. Translation: ADA79432.1.
RefSeq	YP_005831912.1. NC_017453.1.
3D structure databases
ProteinModelPortal	D2AKB3.
SMR	D2AKB3. Positions 13-435.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADA79432; ADA79432; NE061598_10020.
GeneID	12438468.
KEGG	ftr:NE061598_10020.
PATRIC	36820912. VBIFraTul19263_2016.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000070228.
KO	K01580.
OMA	WESGHSS.
Enzyme and pathway databases
BioCyc	FTUL510831:GLDG-1804-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

D2AKB3_FRATE

Accession

Primary (citable) accession number: D2AKB3

Entry history

Integrated into UniProtKB/TrEMBL:	February 9, 2010
Last sequence update:	February 9, 2010
Last modified:	May 29, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)