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D2AKB3

- D2AKB3_FRATE

UniProt

D2AKB3 - D2AKB3_FRATE

Protein

Glutamate decarboxylase

Gene

NE061598_10020

Organism
Francisella tularensis subsp. tularensis (strain NE061598)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (09 Feb 2010)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciFTUL510831:GLDG-1804-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    Ordered Locus Names:NE061598_10020Imported
    OrganismiFrancisella tularensis subsp. tularensis (strain NE061598)Imported
    Taxonomic identifieri510831 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaThiotrichalesFrancisellaceaeFrancisella
    ProteomesiUP000001885: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD2AKB3.
    SMRiD2AKB3. Positions 13-435.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiERQTGID.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D2AKB3-1 [UniParc]FASTAAdd to Basket

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    MALHGKKDTI DNLDFFEQSL PKFKLPLNSQ DPLEVYQEIK DELMLDGNSK    50
    QNLATFCQTE VDDFIHKLMD DCIDKNMIDK DEYPQTAEIE SRCVNILANL 100
    WNSSAENAIG CSTTGSSEAA MLGGMAMKWR WRDKMKAQGK DYTKPNLVTG 150
    PVQVCWHKFA RYWDIELREI PMSNESLIMT PEAVLERCDE NTIGVVPTLG 200
    VTFTGQYEPV EQVCKALDDF ERQTGVDIPV HVDAASGGFL APFVEPELKW 250
    DFRLPRVKSI NSSGHKFGLS PLGVGWVIWA DKKYLPDDLI FNVNYLGGNM 300
    PAFALNFSRL GGQIVAQYYN FVRLGFEGYK KVHQLCYDVA EYIAKELRKM 350
    EIFEIIHAGE GGIPAVSWSL KATKEYSLFD ISEKVRAKGW QIAAYTMPNN 400
    REDLVVMRVL VRRGFSYDLA QLMIRDLVAV IDSLEGKLKI LKRSSFAH 448
    Length:448
    Mass (Da):50,815
    Last modified:February 9, 2010 - v1
    Checksum:i2A48F8FD23CA64D4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001633 Genomic DNA. Translation: ADA79432.1.
    RefSeqiYP_005831912.1. NC_017453.1.

    Genome annotation databases

    EnsemblBacteriaiADA79432; ADA79432; NE061598_10020.
    GeneIDi12438468.
    KEGGiftr:NE061598_10020.
    PATRICi36820912. VBIFraTul19263_2016.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001633 Genomic DNA. Translation: ADA79432.1 .
    RefSeqi YP_005831912.1. NC_017453.1.

    3D structure databases

    ProteinModelPortali D2AKB3.
    SMRi D2AKB3. Positions 13-435.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADA79432 ; ADA79432 ; NE061598_10020 .
    GeneIDi 12438468.
    KEGGi ftr:NE061598_10020.
    PATRICi 36820912. VBIFraTul19263_2016.

    Phylogenomic databases

    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi ERQTGID.

    Enzyme and pathway databases

    BioCyci FTUL510831:GLDG-1804-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Large direct repeats flank genomic rearrangements between a new clinical isolate of Francisella tularensis subsp. tularensis A1 and Schu S4."
      Nalbantoglu U., Sayood K., Dempsey M.P., Iwen P.C., Francesconi S.C., Barabote R.D., Xie G., Brettin T.S., Hinrichs S.H., Fey P.D.
      PLoS ONE 5:E9007-E9007(2010)
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NE061598Imported.

    Entry informationi

    Entry nameiD2AKB3_FRATE
    AccessioniPrimary (citable) accession number: D2AKB3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 9, 2010
    Last sequence update: February 9, 2010
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3