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D2AKB3 (D2AKB3_FRATE) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length448 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
D2AKB3 [UniParc].

Last modified February 9, 2010. Version 1.
Checksum: 2A48F8FD23CA64D4

FASTA44850,815
        10         20         30         40         50         60 
MALHGKKDTI DNLDFFEQSL PKFKLPLNSQ DPLEVYQEIK DELMLDGNSK QNLATFCQTE 

        70         80         90        100        110        120 
VDDFIHKLMD DCIDKNMIDK DEYPQTAEIE SRCVNILANL WNSSAENAIG CSTTGSSEAA 

       130        140        150        160        170        180 
MLGGMAMKWR WRDKMKAQGK DYTKPNLVTG PVQVCWHKFA RYWDIELREI PMSNESLIMT 

       190        200        210        220        230        240 
PEAVLERCDE NTIGVVPTLG VTFTGQYEPV EQVCKALDDF ERQTGVDIPV HVDAASGGFL 

       250        260        270        280        290        300 
APFVEPELKW DFRLPRVKSI NSSGHKFGLS PLGVGWVIWA DKKYLPDDLI FNVNYLGGNM 

       310        320        330        340        350        360 
PAFALNFSRL GGQIVAQYYN FVRLGFEGYK KVHQLCYDVA EYIAKELRKM EIFEIIHAGE 

       370        380        390        400        410        420 
GGIPAVSWSL KATKEYSLFD ISEKVRAKGW QIAAYTMPNN REDLVVMRVL VRRGFSYDLA 

       430        440 
QLMIRDLVAV IDSLEGKLKI LKRSSFAH 

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References

[1]"Large direct repeats flank genomic rearrangements between a new clinical isolate of Francisella tularensis subsp. tularensis A1 and Schu S4."
Nalbantoglu U., Sayood K., Dempsey M.P., Iwen P.C., Francesconi S.C., Barabote R.D., Xie G., Brettin T.S., Hinrichs S.H., Fey P.D.
PLoS ONE 5:E9007-E9007(2010)
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NE061598 EMBL ADA79432.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001633 Genomic DNA. Translation: ADA79432.1.
RefSeqYP_005831912.1. NC_017453.1.

3D structure databases

ProteinModelPortalD2AKB3.
SMRD2AKB3. Positions 13-435.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADA79432; ADA79432; NE061598_10020.
GeneID12438468.
KEGGftr:NE061598_10020.
PATRIC36820912. VBIFraTul19263_2016.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMAERQTGID.

Enzyme and pathway databases

BioCycFTUL510831:GLDG-1804-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameD2AKB3_FRATE
AccessionPrimary (citable) accession number: D2AKB3
Entry history
Integrated into UniProtKB/TrEMBL: February 9, 2010
Last sequence update: February 9, 2010
Last modified: October 16, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)