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D2AIB3

- D2AIB3_SHIF2

UniProt

D2AIB3 - D2AIB3_SHIF2

Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

amyA

Organism
Shigella flexneri serotype X (strain 2002017)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (09 Feb 2010)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro
    2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciSFLE591020:GLK5-2156-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Cytoplasmic alpha-amylaseImported
    Gene namesi
    Name:amyAImported
    Ordered Locus Names:SFxv_2199Imported
    OrganismiShigella flexneri serotype X (strain 2002017)Imported
    Taxonomic identifieri591020 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeShigella
    ProteomesiUP000001884: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliD2AIB3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000094847.
    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    D2AIB3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRNPTLLQCF HWYYPEGGKL WPELAERADG FNDIGINMVW LPPAYKGASG    50
    GYSVGYDSYD LFDLGEFDQK GSIPTKYGDK AQLLAAIDAL KRNDIAVLLD 100
    VVVNHKMGAD EKEAIRVQRV NADDRTQIDE EIIECEGWTR YTFPARAGQY 150
    SQFIWDFKCF SGIDHIEHPD EDGIFKIVND YTGEGWNDQV DDELGNFDYL 200
    MGENIDFRNH AVTEEIKYWA RWVMEQTQCD GFRLDAVKHI PAWFYKEWIE 250
    HVQEVAPKPL FIVAECWSHE VDKLQTYIDQ VEGKTMLFDA PLQMKFHEAS 300
    RMGRDYDMTQ IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL 350
    AYALILLREN GVPSVFYPDL YGAHYEDVGG DGQTYPIDMP IIEQLDELIL 400
    ARQRFAHGVQ TLFFDHPNCI AFSRSGTDEY PGCVVVMSNG DDGEKTIHLG 450
    ENYGNKTWRD FLGNRQESVV TDENGEATFF CNGGSVSVWV IEEVI 495
    Length:495
    Mass (Da):56,549
    Last modified:February 9, 2010 - v1
    Checksum:iB223911C81CD834D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001383 Genomic DNA. Translation: ADA74352.1.
    RefSeqiYP_005727645.1. NC_017328.1.

    Genome annotation databases

    EnsemblBacteriaiADA74352; ADA74352; SFxv_2199.
    GeneIDi12318748.
    KEGGisfe:SFxv_2199.
    PATRICi36746093. VBIShiFle60233_2379.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001383 Genomic DNA. Translation: ADA74352.1 .
    RefSeqi YP_005727645.1. NC_017328.1.

    3D structure databases

    ProteinModelPortali D2AIB3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADA74352 ; ADA74352 ; SFxv_2199 .
    GeneIDi 12318748.
    KEGGi sfe:SFxv_2199.
    PATRICi 36746093. VBIShiFle60233_2379.

    Phylogenomic databases

    HOGENOMi HOG000094847.
    KOi K01176.

    Enzyme and pathway databases

    BioCyci SFLE591020:GLK5-2156-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Emergence of a new multidrug-resistant serotype X variant in an epidemic clone of Shigella flexneri."
      Ye C., Lan R., Xia S., Zhang J., Sun Q., Zhang S., Jing H., Wang L., Li Z., Zhou Z., Zhao A., Cui Z., Cao J., Jin D., Huang L., Wang Y., Luo X., Bai X.
      , Wang Y., Wang P., Xu Q., Xu J.
      J. Clin. Microbiol. 48:419-426(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2002017Imported.

    Entry informationi

    Entry nameiD2AIB3_SHIF2
    AccessioniPrimary (citable) accession number: D2AIB3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 9, 2010
    Last sequence update: February 9, 2010
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3